RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 LMAN2LQ9H0V9 348 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 EPHX3Q9H6B9 360 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 RNF122Q9H9V4 155 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ADAP2Q9NPF8 381 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 SMCO4Q9NRQ5 59 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 CES1P1Q9UKY3 287 aa14.72□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF729A6NN14 1252 aaPredicted RBP14.71□□□□□ -0.05
LINC00554-201ENST00000564841 GPANK1O95872 356 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 SLC25A4P12235 298 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 RPL4P36578 427 aaKnown RBP14.71□□□□□ -0.05
LINC00554-201ENST00000564841 MNDAP41218 407 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 Q499Y3 187 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 DHRS11Q6UWP2 260 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 OR5AK2Q8NH90 309 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 RNF141Q8WVD5 230 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 MARS2Q96GW9 593 aaKnown RBP14.71□□□□□ -0.05
LINC00554-201ENST00000564841 MEGF10Q96KG7 1140 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 MENTQ9BUN1 341 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 FGF22Q9HCT0 170 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 PRDM7Q9NQW5 492 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 MMP26Q9NRE1 261 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 C5orf51A6NDU8 294 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 ADH1BP00325 375 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 CD63P08962 238 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 CSRP1P21291 193 aaKnown RBP14.71□□□□□ -0.05
LINC00554-201ENST00000564841 IGFALSP35858 605 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 ADPRHP54922 357 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 METRNLQ641Q3 311 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 ADAMTSL4Q6UY14 1074 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 BPIFB2Q8N4F0 458 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 FAM24BQ8N5W8 94 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 PLPP7Q8NBV4 271 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 SEMA6DQ8NFY4 1073 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 CCDC107Q8WV48 283 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 SECTM1Q8WVN6 248 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 S1PR5Q9H228 398 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 CYTL1Q9NRR1 136 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 FLRT3Q9NZU0 649 aa14.71□□□□□ -0.05
LINC00554-201ENST00000564841 APOBEC3BQ9UH17 382 aaKnown RBP14.71□□□□□ -0.05
LINC00554-201ENST00000564841 CDV3Q9UKY7 258 aaKnown RBP14.71□□□□□ -0.05
LINC00554-201ENST00000564841 EML5Q05BV3 1969 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 TVP23AA6NH52 213 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 OIP5O43482 229 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 ACKR3P25106 362 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 LTBRP36941 435 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 LPAR6P43657 344 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 PGDP52209 483 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 RPS21P63220 83 aaKnown RBP14.71□□□□□ -0.06
LINC00554-201ENST00000564841 RNF212Q495C1 297 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 VWA2Q5GFL6 755 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 SLC48A1Q6P1K1 146 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.71□□□□□ -0.06
LINC00554-201ENST00000564841 PARGQ86W56 976 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 SFXN5Q8TD22 340 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 SEH1LQ96EE3 360 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF681Q96N22 645 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 CALML5Q9NZT1 146 aa14.71□□□□□ -0.06
LINC00554-201ENST00000564841 C17orf113A0A1B0GUU1 675 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 WRBO00258 174 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 GPRIN2O60269 458 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 IFNGP01579 166 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 AKR1C4P17516 323 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 NDUFB7P17568 137 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 AGAP20933 346 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 DEFA6Q01524 100 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 POU4F2Q12837 409 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 KLHL26Q53HC5 615 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 PYY3Q5JQD4 70 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 ABHD13Q7L211 337 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 OR4K17Q8NGC6 315 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 SLC2A12Q8TD20 617 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 SGK3Q96BR1 496 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 MS4A6EQ96DS6 147 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 DNAJA3Q96EY1 480 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 ZNF350Q9GZX5 532 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 TMEM100Q9NV29 134 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 TAS2R8Q9NYW2 309 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 METTL1Q9UBP6 276 aaKnown RBP14.7□□□□□ -0.06
LINC00554-201ENST00000564841 A0A1W2PQF6 199 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 CXorf65A6NEN9 183 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 H0YIZ8 118 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 PRKNO60260 465 aaPredicted RBP14.7□□□□□ -0.06
LINC00554-201ENST00000564841 EML2O95834 649 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 TPT1P13693 172 aaKnown RBP14.7□□□□□ -0.06
LINC00554-201ENST00000564841 EIF2S3P41091 472 aaKnown RBP14.7□□□□□ -0.06
LINC00554-201ENST00000564841 DIO1P49895 249 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 MOGAT2Q3SYC2 334 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 ZSCAN4Q8NAM6 433 aaPredicted RBP14.7□□□□□ -0.06
LINC00554-201ENST00000564841 ADAD2Q8NCV1 583 aaKnown RBP14.7□□□□□ -0.06
LINC00554-201ENST00000564841 OR52E1Q8NGJ3 308 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 CHRNA9Q9UGM1 479 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 IKZF2Q9UKS7 526 aa14.7□□□□□ -0.06
LINC00554-201ENST00000564841 PPIHO43447 177 aaKnown RBP14.69□□□□□ -0.06
LINC00554-201ENST00000564841 IGHV2-5P01817 119 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 CEACAM5P06731 702 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 FOLR2P14207 255 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 RCC1P18754 421 aaPredicted RBP14.69□□□□□ -0.06
LINC00554-201ENST00000564841 P2RY4P51582 365 aa14.69□□□□□ -0.06
LINC00554-201ENST00000564841 PRDX1Q06830 199 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms