RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 GTF3AQ92664 365 aaKnown RBP14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 LRRC37BQ96QE4 947 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 ZNF665Q9H7R5 613 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 SAP30LQ9HAJ7 183 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 TUBG2Q9NRH3 451 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 DECR2Q9NUI1 292 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 RHCGQ9UBD6 479 aa14.64□□□□□ -0.07
VPS9D1-203ENST00000563798 NDUFAB1O14561 156 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 CCDC22O60826 627 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 CD55P08174 381 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 CD14P08571 375 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 MPV17P39210 176 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 HFEQ30201 348 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ACSM5Q6NUN0 579 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ZNF730Q6ZMV8 503 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 RFPL4BQ6ZWI9 263 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 FAM122BQ7Z309 247 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 TSEN54Q7Z6J9 526 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 TEX29Q8N6K0 151 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ICA1LQ8NDH6 482 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 OR13C2Q8NGS9 318 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ZFAND2BQ8WV99 257 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ELMOD3Q96FG2 381 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 DIRC2Q96SL1 478 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 OR2J1Q9GZK6 312 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 EFCAB1Q9HAE3 211 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ELOVL3Q9HB03 270 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 G6PC2Q9NQR9 355 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 POLE4Q9NR33 117 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 NDRG4Q9ULP0 352 aaKnown RBP14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 WIPI2Q9Y4P8 454 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 ANK2Q01484 3957 aa14.63□□□□□ -0.07
VPS9D1-203ENST00000563798 PLSCR5A0PG75 271 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 C12orf71A8MTZ7 269 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 CLDN25C9JDP6 229 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 CDC42EP2O14613 210 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 NGFP01138 241 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 ZNF26P17031 533 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 ITGA2P17301 1181 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 GSK3BP49841 420 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 SLC7A2P52569 658 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 PPP1CBP62140 327 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 GLO1Q04760 184 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 SCGB2A2Q13296 93 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 TSTQ16762 297 aaKnown RBP14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 ZBED5Q49AG3 693 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 TBPL2Q6SJ96 375 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 RAB1CQ92928 201 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 RAB39BQ96DA2 213 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 TIMD4Q96H15 378 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 HSH2DQ96JZ2 352 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 C4orf45Q96LM5 186 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 NMNAT1Q9HAN9 279 aaPredicted RBP14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 LPAR2Q9HBW0 351 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 TBCCD1Q9NVR7 557 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 ABCD2Q9UBJ2 740 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 ZDHHC8Q9ULC8 765 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 ENPP4Q9Y6X5 453 aa14.62□□□□□ -0.07
VPS9D1-203ENST00000563798 A0A1W2PRQ8 180 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 ZSCAN5BA6NJL1 495 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 GSTA4O15217 222 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 PTP4A3O75365 173 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 UBOX5O94941 541 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 ZNF682O95780 498 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 PNPP00491 289 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 SERPINA1P01009 418 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 IGHV2-5P01817 119 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 SCG5P05408 212 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 ARHGDIAP52565 204 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 MVKQ03426 396 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 DGCR6Q14129 220 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 MESTQ5EB52 335 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 SPATA46Q5T0L3 261 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 AVPI1Q5T686 147 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 ZNF774Q6NX45 483 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 ARL9Q6T311 187 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 C1orf229Q6ZS94 237 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 FKBP9P1Q75LS8 142 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 MEX3DQ86XN8 651 aaKnown RBP14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 ABHD4Q8TB40 342 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 SLC7A13Q8TCU3 470 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 GPX7Q96SL4 187 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 EGLN1Q9GZT9 426 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 METTL17Q9H7H0 456 aaPredicted RBP14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 GRHPRQ9UBQ7 328 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 TMEM5Q9Y2B1 443 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 CACNG2Q9Y698 323 aa14.61□□□□□ -0.07
VPS9D1-203ENST00000563798 A0A1W2PPL8 197 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 PRSS37A4D1T9 235 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 J3QLI3 93 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 TPD52L2O43399 206 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 PLPP2O43688 288 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 MDH1P40925 334 aaKnown RBP14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 GPR4P46093 362 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 LIMS1P48059 325 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 SLC3A1Q07837 685 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 SCRN3Q0VDG4 424 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 ZMAT1Q5H9K5 638 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 ZER1Q7Z7L7 766 aa14.6□□□□□ -0.07
VPS9D1-203ENST00000563798 CYP4Z1Q86W10 505 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms