RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 KRT77Q7Z794 578 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF100Q8IYN0 542 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 OR2AJ1Q8NGZ0 328 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF837Q96EG3 531 aaPredicted RBP19.37■□□□□ 0.69
LINC01960-201ENST00000563759 OR8B4Q96RC9 309 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 MROQ9BYG7 248 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 GLRX2Q9NS18 164 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 CYB5R1Q9UHQ9 305 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 SPTA1P02549 2419 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 TPOP07202 933 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 GABRA5P31644 462 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ROR2Q01974 943 aaKnown RBP19.37■□□□□ 0.69
LINC01960-201ENST00000563759 KCNMB1Q16558 191 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 TSPO2Q5TGU0 170 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF324BQ6AW86 544 aaPredicted RBP19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ARL9Q6T311 187 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 LRRN1Q6UXK5 716 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 CPT1CQ8TCG5 803 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 TMEM203Q969S6 136 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 C12orf49Q9H741 205 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 EXOSC4Q9NPD3 245 aaKnown RBP19.37■□□□□ 0.69
LINC01960-201ENST00000563759 SLCO1C1Q9NYB5 712 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 ASH2LQ9UBL3 628 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 STUB1Q9UNE7 303 aa19.37■□□□□ 0.69
LINC01960-201ENST00000563759 RP1L1Q8IWN7 2480 aaPredicted RBP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 RPP14O95059 124 aaKnown RBP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 ATE1O95260 518 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 EDNRAP25101 427 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 PSMB10P40306 273 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 VBP1P61758 197 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 RPS25P62851 125 aaKnown RBP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 SIRPAP78324 504 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 SF3B4Q15427 424 aaKnown RBP eCLIP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 CEACAM16Q2WEN9 425 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 FOXL2NBQ6ZUU3 175 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 LINGO2Q7L985 606 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 NUFIP2Q7Z417 695 aaKnown RBP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 GCNT2Q8N0V5 402 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 ST7LQ8TDW4 575 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 TMED9Q9BVK6 235 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 LINC00470Q9BZP3 86 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 GPR35Q9HC97 309 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 SLC7A10Q9NS82 523 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 LHFPL6Q9Y693 200 aa19.36■□□□□ 0.69
LINC01960-201ENST00000563759 SIRT4Q9Y6E7 314 aaPredicted RBP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 INTS1Q8N201 2190 aaKnown RBP19.36■□□□□ 0.69
LINC01960-201ENST00000563759 SLC22A1O15245 554 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 LRRTM2O43300 516 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ABHD16AO95870 558 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 NCS1P62166 190 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 MRPS34P82930 218 aaKnown RBP19.35■□□□□ 0.69
LINC01960-201ENST00000563759 LIPNQ5VXI9 398 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF679Q8IYX0 411 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 UBE2J2Q8N2K1 259 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 HAVCR2Q8TDQ0 301 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 WNT2BQ93097 391 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 NABP1Q96AH0 204 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF416Q9BWM5 594 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 C1orf198Q9H425 327 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 PRORYQ9H606 182 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ELOVL3Q9HB03 270 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 UPB1Q9UBR1 384 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 GDF2Q9UK05 429 aaPredicted RBP19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ZNF587BE7ETH6 402 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 SS18L1O75177 396 aaPredicted RBP19.35■□□□□ 0.69
LINC01960-201ENST00000563759 WNT11O96014 354 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 NPR2P20594 1047 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 LSM6P62312 80 aaKnown RBP19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ROM1Q03395 351 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 SLC3A1Q07837 685 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 MRPL28Q13084 256 aaKnown RBP19.35■□□□□ 0.69
LINC01960-201ENST00000563759 AQP6Q13520 282 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 GPR50Q13585 617 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 CCDC58Q4VC31 144 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 OR7E24Q6IFN5 339 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 EGFL6Q8IUX8 553 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 LRRC18Q8N456 261 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 TM9SF2Q99805 663 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 FOXB1Q99853 325 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 DCUN1D5Q9BTE7 237 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 ST6GALNAC2Q9UJ37 374 aa19.35■□□□□ 0.69
LINC01960-201ENST00000563759 HSPB2A8KAH6 182 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 GABRA1P14867 456 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 B4GALT1P15291 398 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 ABOP16442 354 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 CDK5R1Q15078 307 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 HSPB2Q16082 182 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 RPL22L1Q6P5R6 122 aaKnown RBP19.34■□□□□ 0.69
LINC01960-201ENST00000563759 CD163Q86VB7 1156 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 KDF1Q8NAX2 398 aaPredicted RBP19.34■□□□□ 0.69
LINC01960-201ENST00000563759 SLAMF6Q96DU3 332 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 SMIM19Q96E16 107 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 TMEM38BQ9NVV0 291 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 SSR3Q9UNL2 185 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 EMC9Q9Y3B6 208 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 LRP12Q9Y561 859 aa19.34■□□□□ 0.69
LINC01960-201ENST00000563759 TRBV2A0A0J9YWF9 115 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 A0A1W2PPW3 197 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 FIGNL2A6NMB9 653 aa19.33■□□□□ 0.69
LINC01960-201ENST00000563759 PLPP2O43688 288 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms