RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 CGB2Q6NT52 195 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 TMEM53Q6P2H8 277 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ULK3Q6PHR2 472 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 PIGWQ7Z7B1 504 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 SPICQ8N5J4 248 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 FITM2Q8N6M3 262 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 NOXO1Q8NFA2 376 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 BBS10Q8TAM1 723 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ITLN1Q8WWA0 313 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 GTF2H4Q92759 462 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 SLC47A1Q96FL8 570 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ZBTB18Q99592 522 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF426Q9BUY5 554 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 FAM107BQ9H098 131 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 IKZF5Q9H5V7 419 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 SDR39U1Q9NRG7 319 aaPredicted RBP8.63□□□□□ -1.03
SF3B3-204ENST00000563739 ZIM2Q9NZV7 527 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 TESQ9UGI8 421 aaKnown RBP8.63□□□□□ -1.03
SF3B3-204ENST00000563739 LRCH1Q9Y2L9 728 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 RNF114Q9Y508 228 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
SF3B3-204ENST00000563739 TRBV5-3A0A0A0MS03 114 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 A0A0G2JND7 137 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 TMEM178BH3BS89 294 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 GPR137BO60478 399 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF205O95201 554 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 SCG5P05408 212 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ASAH2BP0C7U1 165 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 TROVE2P10155 538 aaKnown RBP eCLIP8.62□□□□□ -1.03
SF3B3-204ENST00000563739 AHCYP23526 432 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 STOMP27105 288 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 STX1BP61266 288 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 PPP1CBP62140 327 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 MRPS34P82930 218 aaKnown RBP8.62□□□□□ -1.03
SF3B3-204ENST00000563739 TNFAIP6P98066 277 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-204ENST00000563739 PSG4Q00888 419 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 SLC3A1Q07837 685 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 HLXQ14774 488 aaPredicted RBP8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF718Q3SXZ3 478 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 FAM201AQ5SY85 155 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF841Q6ZN19 808 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 Q6ZSV7 163 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 KLBQ86Z14 1044 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 LRRC18Q8N456 261 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 GPR32P1Q8NGA4 272 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 NFKBIDQ8NI38 313 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 RAB40AQ8WXH6 277 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ASB10Q8WXI3 467 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF566Q969W8 418 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 TBX15Q96SF7 602 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF607Q96SK3 696 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 NSRP1Q9H0G5 558 aaKnown RBP8.62□□□□□ -1.03
SF3B3-204ENST00000563739 TMEM165Q9HC07 324 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 RPS6KB2Q9UBS0 482 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 OR5V1Q9UGF6 321 aa8.62□□□□□ -1.03
SF3B3-204ENST00000563739 KIR2DS1A0A191URI9 304 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 C5orf49A4QMS7 147 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 MEGF11A6BM72 1044 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 H3BSA7 217 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 M0R3H8 397 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TNFRSF13BO14836 293 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 PIN1P1O15428 100 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TRMUO75648 421 aaKnown RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SLC22A3O75751 556 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 MT-ATP6P00846 226 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 IGHV4-59P01825 116 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SFTPBP07988 381 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TSPAN19P0C672 248 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ETS2P15036 469 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 MDH2P40926 338 aaKnown RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 PMELP40967 661 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 UGT2B15P54855 530 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 FGF12P61328 243 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SLC36A2Q495M3 483 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ESCO2Q56NI9 601 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 MTX3Q5HYI7 312 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ARMC4Q5T2S8 1044 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SLC2A7Q6PXP3 512 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 LYPD2Q6UXB3 125 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 FOXL2NBQ6ZUU3 175 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 DPPA2Q7Z7J5 298 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SNX32Q86XE0 403 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TREML1Q86YW5 311 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 RBM45Q8IUH3 476 aaKnown RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 KLHL36Q8N4N3 616 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TMEM86BQ8N661 226 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 OR1J2Q8NGS2 313 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ZNF420Q8TAQ5 688 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 ABHD4Q8TB40 342 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 HDAC2Q92769 488 aaKnown RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 UBE2FQ969M7 185 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SAMD8Q96LT4 415 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 EPYCQ99645 322 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 PRSS27Q9BQR3 290 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TMEM246Q9BRR3 403 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 SSBP3Q9BWW4 388 aaPredicted RBP8.61□□□□□ -1.03
SF3B3-204ENST00000563739 TMEM120AQ9BXJ8 343 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 RNF121Q9H920 327 aa8.61□□□□□ -1.03
SF3B3-204ENST00000563739 MEPEQ9NQ76 525 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms