RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 ARL9Q6T311 187 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 PGAM4Q8N0Y7 254 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 PYURFQ96I23 114 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 RSRC1Q96IZ7 334 aaKnown RBP14.42□□□□□ -0.1
CLK3-210ENST00000563112 ZNF416Q9BWM5 594 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 WNT5BQ9H1J7 359 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 POLE4Q9NR33 117 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 V9GYQ6 96 aa14.42□□□□□ -0.1
CLK3-210ENST00000563112 LOC100509620A0A075B734 347 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 PRSS37A4D1T9 235 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 UNC119BA6NIH7 251 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 TPD52L2O43399 206 aaKnown RBP14.41□□□□□ -0.1
CLK3-210ENST00000563112 DIRAS1O95057 198 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 IGHV3-13P01766 116 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 IGFBP5P24593 272 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 GYS2P54840 703 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 TEKQ02763 1124 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 MESTQ5EB52 335 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 C16orf89Q6UX73 402 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 LINC01356Q8N9X3 169 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 OR52J3Q8NH60 311 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 NSMCE2Q96MF7 247 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 CDRT15Q96T59 188 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 ELOVL3Q9HB03 270 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 DECR2Q9NUI1 292 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 NKIRAS2Q9NYR9 191 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 NDRG4Q9ULP0 352 aaKnown RBP14.41□□□□□ -0.1
CLK3-210ENST00000563112 SIGLEC7Q9Y286 467 aa14.41□□□□□ -0.1
CLK3-210ENST00000563112 TEX13CA0A0J9YWL9 993 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 TRBV4-1A0A0J9YWV2 114 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 PLSCR5A0PG75 271 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 PPIHO43447 177 aaKnown RBP14.4□□□□□ -0.1
CLK3-210ENST00000563112 GADD45GO95257 159 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 ZNF26P17031 533 aaPredicted RBP14.4□□□□□ -0.1
CLK3-210ENST00000563112 SDHAP31040 664 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 MAGEB1P43366 347 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 OMPP47874 163 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 LIMS1P48059 325 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 RPS6KA3P51812 740 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 MNAT1P51948 309 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 ARHGDIAP52565 204 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 SCRN3Q0VDG4 424 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 KRR1Q13601 381 aaKnown RBP14.4□□□□□ -0.1
CLK3-210ENST00000563112 ENDOGQ14249 297 aaKnown RBP14.4□□□□□ -0.1
CLK3-210ENST00000563112 TRIP10Q15642 601 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 FAM120AOSQ5T036 256 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 ZNF774Q6NX45 483 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 DPY19L2P2Q6ZN68 376 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 CXXC5Q7LFL8 322 aaKnown RBP14.4□□□□□ -0.1
CLK3-210ENST00000563112 FAM122BQ7Z309 247 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 PIGWQ7Z7B1 504 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 ZNF101Q8IZC7 436 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 FAM86B1Q8N7N1 296 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 ABHD4Q8TB40 342 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 DHRS1Q96LJ7 313 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 RERGLQ9H628 205 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 EMC7Q9NPA0 242 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 NRIP3Q9NQ35 241 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 ARL8BQ9NVJ2 186 aa14.4□□□□□ -0.1
CLK3-210ENST00000563112 FBN1P35555 2871 aaKnown RBP14.4□□□□□ -0.1
CLK3-210ENST00000563112 SLC16A7O60669 478 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 KHDRBS3O75525 346 aaKnown RBP14.39□□□□□ -0.11
CLK3-210ENST00000563112 NCR1O76036 304 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 COX5BP10606 129 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 SRD5A1P18405 259 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 IL2RGP31785 369 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 WNT5AP41221 380 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 PPP1CBP62140 327 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 CCL8P80075 99 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 SPIBQ01892 262 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 GLO1Q04760 184 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 SEC23BQ15437 767 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 SPATS1Q496A3 300 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 SPATA46Q5T0L3 261 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 ADCK1Q86TW2 530 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 SLC25A40Q8TBP6 338 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 YIPF5Q969M3 257 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 RASD2Q96D21 266 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 MARS2Q96GW9 593 aaKnown RBP14.39□□□□□ -0.11
CLK3-210ENST00000563112 C4orf45Q96LM5 186 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 GPX7Q96SL4 187 aaPredicted RBP14.39□□□□□ -0.11
CLK3-210ENST00000563112 SOX7Q9BT81 388 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 ZNF275Q9NSD4 429 aaPredicted RBP14.39□□□□□ -0.11
CLK3-210ENST00000563112 CD300AQ9UGN4 299 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 IL20RAQ9UHF4 553 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 TMCC3Q9ULS5 477 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 IER3IP1Q9Y5U9 82 aa14.39□□□□□ -0.11
CLK3-210ENST00000563112 DNHD1Q96M86 4753 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 H3BSA7 217 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 SOCS2O14508 198 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 ARPC2O15144 300 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 SGCEO43556 437 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 CDC14BO60729 498 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 FABP3P05413 133 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 CTLA4P16410 223 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 PCMT1P22061 227 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 MSX2P35548 267 aaPredicted RBP14.38□□□□□ -0.11
CLK3-210ENST00000563112 IFNGR2P38484 337 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 LIPAP38571 399 aa14.38□□□□□ -0.11
CLK3-210ENST00000563112 ZNF81P51508 661 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms