RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 C4orf45Q96LM5 186 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 SH3GL1Q99961 368 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 ALG12Q9BV10 488 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 WNT5BQ9H1J7 359 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 NPTNQ9Y639 398 aa10.99□□□□□ -0.65
SF3B3-202ENST00000562722 TENM1Q9UKZ4 2725 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 A0A0G2JND7 137 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 NPIPB13A6NJU9 1138 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 C12orf71A8MTZ7 269 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 NPIPB4C9JG80 1138 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 H3BSA7 217 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 IGF2P01344 180 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 CST2P09228 141 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 THRBP10828 461 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 IFI30P13284 250 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 GSTM3P21266 225 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 ZFP36P26651 326 aaKnown RBP10.98□□□□□ -0.65
SF3B3-202ENST00000562722 IFNA8P32881 189 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 GZMMP51124 257 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 CTXN1P60606 82 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 RPL27P61353 136 aaKnown RBP10.98□□□□□ -0.65
SF3B3-202ENST00000562722 FOXL1Q12952 345 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 LRRC23Q53EV4 343 aaPredicted RBP10.98□□□□□ -0.65
SF3B3-202ENST00000562722 SPRNQ5BIV9 151 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 NANOGP8Q6NSW7 305 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 MICU2Q8IYU8 434 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 SPICQ8N5J4 248 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 OR2Z1Q8NG97 314 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 FNDC8Q8TC99 324 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 LIPHQ8WWY8 451 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 NMD3Q96D46 503 aaKnown RBP10.98□□□□□ -0.65
SF3B3-202ENST00000562722 BPIFA2Q96DR5 249 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 TPD52L3Q96J77 140 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 DUX5Q96PT3 197 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 DCAF16Q9NXF7 216 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 EGFL7Q9UHF1 273 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 PURGQ9UJV8 347 aaKnown RBP10.98□□□□□ -0.65
SF3B3-202ENST00000562722 NDRG4Q9ULP0 352 aaKnown RBP10.98□□□□□ -0.65
SF3B3-202ENST00000562722 AUP1Q9Y679 476 aa10.98□□□□□ -0.65
SF3B3-202ENST00000562722 A6NIZ1 184 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 FSHBP01225 129 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 IGHV2-70P01814 119 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 IGHMP01871 453 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 CD55P08174 381 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 ADH4P08319 380 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 TNFRSF1AP19438 455 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 MSR1P21757 451 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 HTR5AP47898 357 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 RAP1BP61224 184 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 RAP1AP62834 184 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 BAMBIQ13145 260 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 TTMPQ5BVD1 217 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 FAM205BPQ63HN1 556 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 ERICH5Q6P6B1 374 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 SHISA2Q6UWI4 295 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 NPEPL1Q8NDH3 523 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 STON2Q8WXE9 905 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 POP5Q969H6 163 aaKnown RBP10.97□□□□□ -0.65
SF3B3-202ENST00000562722 GPA33Q99795 319 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 MRI1Q9BV20 369 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 C1QTNF5Q9BXJ0 243 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 MMP26Q9NRE1 261 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 TMEM106BQ9NUM4 274 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 OR5V1Q9UGF6 321 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 NUP50Q9UKX7 468 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 HIF3AQ9Y2N7 669 aa10.97□□□□□ -0.65
SF3B3-202ENST00000562722 PPIAL4EA0A075B759 164 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 TRAV27A0A087WT01 109 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 PPIAL4CA0A0B4J2A2 164 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 DNAJC9-AS1A6NH13 148 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 PPIAL4DF5H284 164 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 H7C1C5 153 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 FBP2O00757 339 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 DOK2O60496 412 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 TSPAN19P0C672 248 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 PPIAL4FP0DN26 164 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 HKR1P10072 659 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 RBMXP38159 391 aaKnown RBP10.96□□□□□ -0.65
SF3B3-202ENST00000562722 LCN6P62502 163 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 ST3GAL3Q11203 375 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 PSG7Q13046 419 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 ZNF154Q13106 437 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 ENDOGQ14249 297 aaKnown RBP10.96□□□□□ -0.65
SF3B3-202ENST00000562722 CYBRD1Q53TN4 286 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 ESCO2Q56NI9 601 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 C1orf94Q6P1W5 598 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 CALHM3Q86XJ0 350 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 DEFB108BQ8NET1 73 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 OR8J3Q8NGG0 315 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 OR51A7Q8NH64 312 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 DVL3Q92997 716 aaPredicted RBP10.96□□□□□ -0.65
SF3B3-202ENST00000562722 LRRC58Q96CX6 371 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 PRRC1Q96M27 445 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 MAGEB18Q96M61 343 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 ZNF747Q9BV97 191 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 EMC7Q9NPA0 242 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 MAN2C1Q9NTJ4 1040 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 ZNF69Q9UC07 566 aa10.96□□□□□ -0.65
SF3B3-202ENST00000562722 PPP1R3CQ9UQK1 317 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms