RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ETFDHQ16134 617 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 HIST3H3Q16695 136 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 PLEKHN1Q494U1 663 aaPredicted RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 TP53I3Q53FA7 332 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 THEM4Q5T1C6 240 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 ZNF684Q5T5D7 378 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 CD200R1LQ6Q8B3 271 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 TUBA1AQ71U36 451 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 TRILQ7L0X0 811 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 SLC22A16Q86VW1 577 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 EGFL6Q8IUX8 553 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 UBQLNLQ8IYU4 475 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 FAM109AQ8N4B1 249 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 ST6GALNAC3Q8NDV1 305 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 OR6N2Q8NGY6 317 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 OR10D3Q8NH80 312 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 OTOSQ8NHW6 89 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 SNX33Q8WV41 574 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 PELI1Q96FA3 418 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 SLC25A44Q96H78 314 aaPredicted RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 ADAD1Q96M93 576 aaKnown RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 FOXN4Q96NZ1 517 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 TM9SF2Q99805 663 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 COQ7Q99807 217 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 SLC6A15Q9H2J7 730 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 RNF167Q9H6Y7 350 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 EXOSC4Q9NPD3 245 aaKnown RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 TIGARQ9NQ88 270 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 CCDC59Q9P031 241 aaKnown RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 ST6GALNAC2Q9UJ37 374 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 LAMP5Q9UJQ1 280 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 GNG8Q9UK08 70 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 SSR3Q9UNL2 185 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 COA3Q9Y2R0 106 aaPredicted RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 KLHDC2Q9Y2U9 406 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 SIRT4Q9Y6E7 314 aaPredicted RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 TMEM14AQ9Y6G1 99 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 ZNF469Q96JG9 3925 aaPredicted RBP6.67□□□□□ -1.34
TPM1-231ENST00000561395 ALPK2Q86TB3 2170 aa6.67□□□□□ -1.34
TPM1-231ENST00000561395 IGKV1D-43A0A0B4J1Z2 117 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 TRDV1A0A1B0GX56 115 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 METTL15A6NJ78 407 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ZNF726A6NNF4 738 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 NPIPA2E9PIF3 369 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 NPIPA3F8WFD2 350 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ACOT7O00154 380 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 MAGEB4O15481 346 aaPredicted RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 PLPP2O43688 288 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CXCL13O43927 109 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 KHDRBS3O75525 346 aaKnown RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 CLPXO76031 633 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ABHD16AO95870 558 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 HLA-DQA2P01906 255 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 HRGP04196 525 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ALOX5APP20292 161 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 GALP22466 123 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 FGF9P31371 208 aaPredicted RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 PEX19P40855 299 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 EIF1AXP47813 144 aaKnown RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 STARP49675 285 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ENTPD1P49961 510 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CLDN17P56750 224 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CLDN18P56856 261 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 FABP5Q01469 135 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 EGR3Q06889 387 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CDK5R1Q15078 307 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 TRAM1Q15629 374 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 BCL2A1Q16548 175 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 DGUOKQ16854 277 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 TEX30Q5JUR7 227 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 PDSS1Q5T2R2 415 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 DMKNQ6E0U4 476 aaPredicted RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 SLC18B1Q6NT16 456 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 SLC25A47Q6Q0C1 308 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ARL9Q6T311 187 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 RPTNQ6XPR3 784 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 PLEKHG7Q6ZR37 379 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CREB3L2Q70SY1 520 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 DPY19L4Q7Z388 723 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 FAM220AQ7Z4H9 259 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 KCTD20Q7Z5Y7 419 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CDH24Q86UP0 819 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 TMEM123Q8N131 208 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 SLC26A10Q8NG04 563 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 TBC1D15Q8TC07 691 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 FNDC8Q8TC99 324 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 RPS4Y2Q8TD47 263 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 ASB17Q8WXJ9 295 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 NANOS1Q8WY41 292 aaKnown RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 TMEM203Q969S6 136 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 CPNE4Q96A23 557 aaPredicted RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 SMIM19Q96E16 107 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 DACH2Q96NX9 599 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 RBP7Q96R05 134 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 OR2M2Q96R28 347 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 SMAD5Q99717 465 aaKnown RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 TMED9Q9BVK6 235 aa6.66□□□□□ -1.34
TPM1-231ENST00000561395 SF3B5Q9BWJ5 86 aaKnown RBP6.66□□□□□ -1.34
TPM1-231ENST00000561395 SLIRPQ9GZT3 109 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms