RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 J3KTA2 159 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 SASH3O75995 380 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 KRT34O76011 436 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 UBOX5O94941 541 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 IFNA14P01570 189 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 MT-ND5P03915 603 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 VIMP08670 466 aaKnown RBP9.86□□□□□ -0.83
USP3-220ENST00000561381 THRBP10828 461 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ANPEPP15144 967 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 GCH1P30793 250 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 PPP1CBP62140 327 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 LCN6P62502 163 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ACTG1P63261 375 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ST3GAL3Q11203 375 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ENDOGQ14249 297 aaKnown RBP9.86□□□□□ -0.83
USP3-220ENST00000561381 FAM209AQ5JX71 171 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 MBNL2Q5VZF2 373 aaKnown RBP9.86□□□□□ -0.83
USP3-220ENST00000561381 CGB2Q6NT52 195 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ERICH5Q6P6B1 374 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 VTCN1Q7Z7D3 282 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 PEG10Q86TG7 708 aaKnown RBP9.86□□□□□ -0.83
USP3-220ENST00000561381 OR4M2Q8NGB6 313 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 OR51A7Q8NH64 312 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ABHD4Q8TB40 342 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ZNF418Q8TF45 676 aaPredicted RBP9.86□□□□□ -0.83
USP3-220ENST00000561381 ZFAND2BQ8WV99 257 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 GEMIN6Q8WXD5 167 aaKnown RBP9.86□□□□□ -0.83
USP3-220ENST00000561381 RAB39BQ96DA2 213 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ELMOD3Q96FG2 381 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 PRRC1Q96M27 445 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 ALG12Q9BV10 488 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 PLA2G12AQ9BZM1 189 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 MSL2Q9HCI7 577 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 SAR1AQ9NR31 198 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 MAN2C1Q9NTJ4 1040 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 FGFR1OP2Q9NVK5 253 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 PCDHB10Q9UN67 800 aa9.86□□□□□ -0.83
USP3-220ENST00000561381 A0A1W2PPL8 197 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 PLSCR5A0PG75 271 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 ISPDA4D126 451 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 FFAR1O14842 300 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 IGHMP01871 453 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 CST2P09228 141 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 HILS1P60008 231 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 LCN2P80188 198 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 TAF11Q15544 211 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 COQ5Q5HYK3 327 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 DCAF12L2Q5VW00 463 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 OTPQ5XKR4 325 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 FOXL2NBQ6ZUU3 175 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 C1QL2Q7Z5L3 287 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 NRMQ8IXM6 262 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 OR2T12Q8NG77 320 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 OR13C2Q8NGS9 318 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 RAB1CQ92928 201 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 TIMD4Q96H15 378 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 C4orf45Q96LM5 186 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 RBP7Q96R05 134 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 SLC6A7Q99884 636 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 GAL3ST1Q99999 423 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 POFUT1Q9H488 388 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 EMC7Q9NPA0 242 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 ESM1Q9NQ30 184 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 CMTM6Q9NX76 183 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 UBAP1Q9NZ09 502 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 OPN4Q9UHM6 478 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 KLHL21Q9UJP4 597 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 TIMM10BQ9Y5J6 103 aa9.85□□□□□ -0.83
USP3-220ENST00000561381 ELOVL7A1L3X0 281 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 BBIP1A8MTZ0 92 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 ICMTO60725 284 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 NPPAP01160 153 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 NR2C1P13056 603 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 ZNF26P17031 533 aaPredicted RBP9.84□□□□□ -0.83
USP3-220ENST00000561381 ZFP36P26651 326 aaKnown RBP9.84□□□□□ -0.83
USP3-220ENST00000561381 ARFIP2P53365 341 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 SELENOWP63302 87 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 PSG7Q13046 419 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 SCGB2A2Q13296 93 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 TBPL2Q6SJ96 375 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 USP43Q70EL4 1123 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 OAFQ86UD1 273 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 ALDH16A1Q8IZ83 802 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 POU5F2Q8N7G0 328 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 FAM216AQ8WUB2 273 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 C22orf15Q8WYQ4 148 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 GCDHQ92947 438 aaPredicted RBP9.84□□□□□ -0.83
USP3-220ENST00000561381 RCN3Q96D15 328 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 C7orf69Q9H7B7 122 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 VIPAS39Q9H9C1 493 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 POLE4Q9NR33 117 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 GID8Q9NWU2 228 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 ARMCX1Q9P291 453 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 ADAM18Q9Y3Q7 739 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 TANC2Q9HCD6 1990 aa9.84□□□□□ -0.83
USP3-220ENST00000561381 TMEM89A2RUT3 159 aa9.83□□□□□ -0.84
USP3-220ENST00000561381 GMNCA6NCL1 334 aa9.83□□□□□ -0.84
USP3-220ENST00000561381 A6NIZ1 184 aa9.83□□□□□ -0.84
USP3-220ENST00000561381 EFCAB9A8MZ26 197 aa9.83□□□□□ -0.84
USP3-220ENST00000561381 J3QLI3 93 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms