RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 A0A1B0GTH9 108 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 NOTOA8MTQ0 251 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 GPR171O14626 319 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 CXCL13O43927 109 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 PNPP00491 289 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 RAF1P04049 648 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 CD46P15529 392 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 WT1P19544 449 aaPredicted RBP11.45□□□□□ -0.58
SNX1-211ENST00000560829 CSNK1A1P48729 337 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 SRSF6Q13247 344 aaKnown RBP11.45□□□□□ -0.58
SNX1-211ENST00000560829 PDSS1Q5T2R2 415 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 GALNTL5Q7Z4T8 443 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 CATSPERDQ86XM0 798 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 SNX29P2Q8IUI4 249 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 ZNF676Q8N7Q3 588 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 IL17RDQ8NFM7 739 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 TIGARQ9NQ88 270 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 COMMD3Q9UBI1 195 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 R4GMQ9 66 aa11.45□□□□□ -0.58
SNX1-211ENST00000560829 TRBV5-7A0A0A0MS05 114 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 A0A1W2PPL8 197 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 A6NL46 340 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 TMEM127O75204 238 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 SRMP19623 302 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
SNX1-211ENST00000560829 MEOX1P50221 254 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 LHX2P50458 406 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 OR10A3P58181 314 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 OXA1LQ15070 435 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 ZNF79Q15937 498 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 OR7E24Q6IFN5 339 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 METAP1DQ6UB28 335 aaPredicted RBP11.44□□□□□ -0.58
SNX1-211ENST00000560829 IGFL2Q6UWQ7 119 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 DCDC5Q6ZRR9 648 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 LYSMD2Q8IV50 215 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 LINC00346Q8IVM7 164 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 UBQLNLQ8IYU4 475 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 OR6N1Q8NGY5 312 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 GPR148Q8TDV2 347 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 PNPLA2Q96AD5 504 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 SOSTQ9BQB4 213 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 C1orf198Q9H425 327 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 POLE4Q9NR33 117 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 FLVCR1Q9Y5Y0 555 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 A0A1W2PPK0 400 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 ACOD1A6NK06 481 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 TBX1O43435 398 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 CYTIPO60759 359 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 SLC19A2O60779 497 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 CELA3AP09093 270 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 OCM2P0CE71 109 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 PRKAR1AP10644 381 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 RFC3P40938 356 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 MAGEA5P43359 124 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 EIF1AXP47813 144 aaKnown RBP11.44□□□□□ -0.58
SNX1-211ENST00000560829 MMP16P51512 607 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 LSM6P62312 80 aaKnown RBP11.44□□□□□ -0.58
SNX1-211ENST00000560829 CLN3Q13286 438 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 BCL2A1Q16548 175 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 IDNKQ5T6J7 187 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 C20orf196Q8IYI0 205 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 CENPSQ8N2Z9 138 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 SLAMF6Q96DU3 332 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 DIRAS2Q96HU8 199 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 SRRQ9GZT4 340 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 ACKR4Q9NPB9 350 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 LHFPL6Q9Y693 200 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 EML6Q6ZMW3 1958 aa11.44□□□□□ -0.58
SNX1-211ENST00000560829 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 PDCD5O14737 125 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 EPXP11678 715 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 ZNF708P17019 499 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 PTBP1P26599 531 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNX1-211ENST00000560829 EVX1P49640 407 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 SELENOPP49908 381 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 CLDN18P56856 261 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 ARG2P78540 354 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 PLGLB1Q02325 96 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 MFGE8Q08431 387 aaPredicted RBP11.43□□□□□ -0.58
SNX1-211ENST00000560829 STEAP3Q658P3 488 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 XKRXQ6PP77 449 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 CORO6Q6QEF8 472 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 SPATC1Q76KD6 591 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 OR10S1Q8NGN2 331 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.43□□□□□ -0.58
SNX1-211ENST00000560829 SEC61A2Q9H9S3 476 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 G6PC2Q9NQR9 355 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 ABCB10Q9NRK6 738 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 ABRACLQ9P1F3 81 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 GDF2Q9UK05 429 aaPredicted RBP11.43□□□□□ -0.58
SNX1-211ENST00000560829 ADAM30Q9UKF2 790 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 MUC6Q6W4X9 2439 aa11.43□□□□□ -0.58
SNX1-211ENST00000560829 FABP12A6NFH5 140 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 ZNF891A8MT65 544 aaPredicted RBP11.42□□□□□ -0.58
SNX1-211ENST00000560829 DHHO43323 396 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 HPGDSO60760 199 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 ISG15P05161 165 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 H2BFMP0C1H6 154 aa11.42□□□□□ -0.58
SNX1-211ENST00000560829 CDAP32320 146 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms