RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 FMODQ06828 376 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 FGD3Q5JSP0 725 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 MBNL2Q5VZF2 373 aaKnown RBP12.05□□□□□ -0.48
TPM1-223ENST00000560445 PEG10Q86TG7 708 aaKnown RBP12.05□□□□□ -0.48
TPM1-223ENST00000560445 LRP11Q86VZ4 500 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 RAB1CQ92928 201 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 MCUR1Q96AQ8 359 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 POM121L2Q96KW2 1035 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 TSPAN32Q96QS1 320 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 OR51B6Q9H340 312 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 NMNAT1Q9HAN9 279 aaPredicted RBP12.05□□□□□ -0.48
TPM1-223ENST00000560445 ZNF275Q9NSD4 429 aaPredicted RBP12.05□□□□□ -0.48
TPM1-223ENST00000560445 MAN2C1Q9NTJ4 1040 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 RHCGQ9UBD6 479 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 MAGEL2Q9UJ55 1249 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 ZDHHC8Q9ULC8 765 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 AURKCQ9UQB9 309 aa12.05□□□□□ -0.48
TPM1-223ENST00000560445 A0A087WUU8 490 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 J3QW42 95 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 MSMBP08118 114 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 IGFBP1P08833 259 aaPredicted RBP12.04□□□□□ -0.48
TPM1-223ENST00000560445 MAKP20794 623 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 LAP3P28838 519 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 IFNGR2P38484 337 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 RPS6KA3P51812 740 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 PSME3P61289 254 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 PPP1CBP62140 327 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 ERVK-25P63136 954 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 PSG4Q00888 419 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 CCNIQ14094 377 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 MSMPQ1L6U9 139 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 C8orf82Q6P1X6 216 aaPredicted RBP12.04□□□□□ -0.48
TPM1-223ENST00000560445 PAQR4Q8N4S7 273 aaPredicted RBP12.04□□□□□ -0.48
TPM1-223ENST00000560445 OR13C2Q8NGS9 318 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 POLE4Q9NR33 117 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 ADA2Q9NZK5 511 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 MYEF2Q9P2K5 600 aaKnown RBP12.04□□□□□ -0.48
TPM1-223ENST00000560445 ATPIF1Q9UII2 106 aa12.04□□□□□ -0.48
TPM1-223ENST00000560445 PRSS37A4D1T9 235 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 SURF4O15260 269 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 TCF21O43680 179 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 SNX3O60493 162 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 ABHD16AO95870 558 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 ADH4P08319 380 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 CRABP1P29762 137 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 SDHAP31040 664 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 GPR4P46093 362 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 RGS6P49758 472 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 CCL8P80075 99 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 AQP6Q13520 282 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 KRR1Q13601 381 aaKnown RBP12.03□□□□□ -0.48
TPM1-223ENST00000560445 TRIP10Q15642 601 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 SPATS1Q496A3 300 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 SAMD4BQ5PRF9 694 aaKnown RBP12.03□□□□□ -0.48
TPM1-223ENST00000560445 IGFN1Q86VF2 1251 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 TREML1Q86YW5 311 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 GLB1L2Q8IW92 636 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 AKR7LQ8NHP1 331 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 CLDND2Q8NHS1 167 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 ABHD4Q8TB40 342 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 TMEM186Q96B77 213 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 C4orf45Q96LM5 186 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 GPX7Q96SL4 187 aaPredicted RBP12.03□□□□□ -0.48
TPM1-223ENST00000560445 RACGAP1Q9H0H5 632 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 MYLK2Q9H1R3 596 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 TBCCD1Q9NVR7 557 aa12.03□□□□□ -0.48
TPM1-223ENST00000560445 A0A0A6YYJ9 748 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 TEX13CA0A0J9YWL9 993 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 LYNX1G3V0Z9 82 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 J3KTA2 159 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 FFAR1O14842 300 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 SGCEO43556 437 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 TIMM8AO60220 97 aaPredicted RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 DOK2O60496 412 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 KHDRBS3O75525 346 aaKnown RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 RP2O75695 350 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 PRSS23O95084 383 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 CLPTM1O96005 669 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 LYNX1P0DP58 116 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 MAGEB1P43366 347 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 HTR5AP47898 357 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 MNAT1P51948 309 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 LSM6P62312 80 aaKnown RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 GLYATQ6IB77 296 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 ACSM5Q6NUN0 579 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 DPY19L2P2Q6ZN68 376 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 USP51Q70EK9 711 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 OR5L1Q8NGL2 311 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 SLC7A13Q8TCU3 470 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 KLF14Q8TD94 323 aaPredicted RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 POP5Q969H6 163 aaKnown RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 MARS2Q96GW9 593 aaKnown RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 DCLRE1CQ96SD1 692 aaKnown RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 GORASP2Q9H8Y8 452 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 DCAF13Q9NV06 445 aaKnown RBP12.02□□□□□ -0.49
TPM1-223ENST00000560445 POLR1DQ9Y2S0 133 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 SNX13Q9Y5W8 968 aa12.02□□□□□ -0.49
TPM1-223ENST00000560445 A0A0G2JMP0 313 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms