RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 RHOXF1Q8NHV9 184 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 RNF217Q8TC41 542 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 RORBQ92753 470 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 OXGR1Q96P68 337 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 VRK1Q99986 396 aaPredicted RBP11.77□□□□□ -0.53
SMAD3-214ENST00000560402 RAB1BQ9H0U4 201 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 MAN2C1Q9NTJ4 1040 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 PCDHGB1Q9Y5G3 927 aa11.77□□□□□ -0.53
SMAD3-214ENST00000560402 A0A087WUU8 490 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 LOC102725191A0A1B0GVB3 256 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 LY6HO94772 140 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 OR4A8P0C604 315 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 CBR1P16152 277 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 SRD5A1P18405 259 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 FPR3P25089 353 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 GSTT1P30711 240 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 ARR3P36575 388 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 RBM34P42696 430 aaKnown RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 RPS5P46782 204 aaKnown RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 IDH3GP51553 393 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 SNRPGP62308 76 aaKnown RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 SLC35A2P78381 396 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 LGALS3BPQ08380 585 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 FOXB2Q5VYV0 432 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 RASSF6Q6ZTQ3 369 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 GPR137CQ8N3F9 429 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 STX19Q8N4C7 294 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 CLDN22Q8N7P3 220 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 IL17RDQ8NFM7 739 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 OR6S1Q8NH40 331 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 DNAJA4Q8WW22 397 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 NEU4Q8WWR8 484 aaPredicted RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 SLC25A36Q96CQ1 311 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 PLEKHA8Q96JA3 519 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 COPS4Q9BT78 406 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 RBM38Q9H0Z9 239 aaKnown RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 DUSP21Q9H596 190 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 SLC25A19Q9HC21 320 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 TBC1D23Q9NUY8 699 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 CNOT2Q9NZN8 540 aaKnown RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 B3GAT1Q9P2W7 334 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 WARS2Q9UGM6 360 aaKnown RBP11.76□□□□□ -0.53
SMAD3-214ENST00000560402 SLC7A7Q9UM01 511 aa11.76□□□□□ -0.53
SMAD3-214ENST00000560402 TRAV36DV7A0A075B6V5 113 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 LOC100289279A0A1B0GTE1 492 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 HTR3EA5X5Y0 456 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 ZNF99A8MXY4 864 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-214ENST00000560402 XPNPEP2O43895 674 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 SOX14O95416 240 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 EPHA2P29317 976 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 TUBA1BP68363 451 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 POU3F1Q03052 451 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-214ENST00000560402 C1DQ13901 141 aaKnown RBP11.75□□□□□ -0.53
SMAD3-214ENST00000560402 RAB39AQ14964 217 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 OR1Q1Q15612 314 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 C12orf73Q69YU5 71 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 SLC27A4Q6P1M0 643 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 AHSA2Q719I0 299 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 TUBA1AQ71U36 451 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 ZER1Q7Z7L7 766 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 OR52L1Q8NGH7 329 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 KTI12Q96EK9 354 aaPredicted RBP11.75□□□□□ -0.53
SMAD3-214ENST00000560402 BCL7BQ9BQE9 202 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 PRR14Q9BWN1 585 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 BPESC1Q9GZL8 116 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 GPR35Q9HC97 309 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 REV1Q9UBZ9 1251 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 MED31Q9Y3C7 131 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 CORINQ9Y5Q5 1042 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 CEPT1Q9Y6K0 416 aa11.75□□□□□ -0.53
SMAD3-214ENST00000560402 A0A096LPE4 126 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 IGHV2OR16-5A0A0B4J2B6 119 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 IGHV4-61A0A0C4DH41 118 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 A0A1B0GWA3 101 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 A0A1W2PPZ6 126 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 M0R082 166 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 TRAF3IP2O43734 574 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CHP2O43745 196 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 WBP4O75554 376 aaKnown RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 TRMUO75648 421 aaKnown RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 HMGN1P05114 100 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 NPR2P20594 1047 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 GIFP27352 417 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CALCRP30988 508 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 TMBIM6P55061 237 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 ARF1P84077 181 aaKnown RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 GINS1Q14691 196 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CARTPTQ16568 116 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 CEACAM16Q2WEN9 425 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 ALG10BQ5I7T1 473 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 VHLLQ6RSH7 139 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 H1FNTQ75WM6 255 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 LSRQ86X29 649 aaPredicted RBP11.74□□□□□ -0.53
SMAD3-214ENST00000560402 TMEM123Q8N131 208 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 OR13F1Q8NGS4 319 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 ZNF417Q8TAU3 575 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 RAB2BQ8WUD1 216 aa11.74□□□□□ -0.53
SMAD3-214ENST00000560402 TMEM239Q8WW34 195 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms