RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 CANT1Q8WVQ1 401 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 NMNAT3Q96T66 252 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 RHNO1Q9BSD3 238 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 CHID1Q9BWS9 393 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 REEP1Q9H902 201 aa12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 SRA1Q9HD15 236 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-211ENST00000559850 C5orf49A4QMS7 147 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 VSTM5A8MXK1 200 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 DNAJC8O75937 253 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 SOX14O95416 240 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 HEXAP06865 529 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 RAP2AP10114 183 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 WNT5AP41221 380 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 GUCA1AP43080 201 aaPredicted RBP12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 YLPM1P49750 1951 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 PPOXP50336 477 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 GLO1Q04760 184 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 TRAP1Q12931 704 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 SPATA46Q5T0L3 261 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 TMEM179BQ7Z7N9 219 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 ADCK1Q86TW2 530 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 RTTNQ86VV8 2226 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 JAZF1Q86VZ6 243 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 SPATA24Q86W54 205 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 ZNF101Q8IZC7 436 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 SDR9C7Q8NEX9 313 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 OR10H5Q8NGA6 315 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 OR52E2Q8NGJ4 325 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 OR1J2Q8NGS2 313 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 C11orf40Q8WZ69 217 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 FAM168AQ92567 244 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 POM121L2Q96KW2 1035 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 CADM1Q9BY67 442 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 TRIM15Q9C019 465 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 C1orf198Q9H425 327 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 TIMM10BQ9Y5J6 103 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 CDH10Q9Y6N8 788 aa12.75□□□□□ -0.37
RABGGTA-211ENST00000559850 A0A1W2PPW3 197 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 DHRS12A0PJE2 317 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 C12orf71A8MTZ7 269 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 LYNX1G3V0Z9 82 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 AHCYL1O43865 530 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 SNAP29O95721 258 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 CST1P01037 141 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 PTHP01270 115 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 LYNX1P0DP58 116 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 NAT2P11245 290 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 NOS3P29474 1203 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 GDI2P50395 445 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 UCP2P55851 309 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 KRTAP1-1Q07627 177 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 BNIP1Q12981 228 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 FLOT2Q14254 428 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 RGS7BPQ6MZT1 257 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 RFPL4BQ6ZWI9 263 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 GLB1L2Q8IW92 636 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 OR6V1Q8N148 313 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 OR1J1Q8NGS3 322 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 SLC7A6Q92536 515 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 GTF3AQ92664 365 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 LRMDAQ9H2I8 198 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 POMPQ9Y244 141 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 FKBP7Q9Y680 259 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 MTORP42345 2549 aa12.74□□□□□ -0.37
RABGGTA-211ENST00000559850 ZANQ9Y493 2812 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 A0A096LNT2 108 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 IGLV1-36A0A0B4J1U3 117 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 OR6C68A6NDL8 312 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 AQP12BA6NM10 295 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 ARPC3O15145 178 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 GSC2O15499 205 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 RENP00797 406 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 GAAP10253 952 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 PCBD1P61457 104 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 RPS23P62266 143 aaKnown RBP12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 MICAQ29983 383 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 TMEM255AQ5JRV8 349 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 AQP12AQ8IXF9 295 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 CYB561A3Q8NBI2 242 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 OR10G2Q8NGC3 310 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 OR4Q3Q8NH05 313 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 NIPSNAP1Q9BPW8 284 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 RAB1BQ9H0U4 201 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 TBC1D23Q9NUY8 699 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 ARMC1Q9NVT9 282 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 REV1Q9UBZ9 1251 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 B9D1Q9UPM9 204 aa12.73□□□□□ -0.37
RABGGTA-211ENST00000559850 SETD2Q9BYW2 2564 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 M0R233 179 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 BHLHE40O14503 412 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 SYNGR3O43761 229 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 DOK2O60496 412 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 NGFP01138 241 aa12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 TP53P04637 393 aaPredicted RBP12.72□□□□□ -0.37
RABGGTA-211ENST00000559850 PCSK6P29122 969 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms