RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 A0A1W2PPV9 198 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 XKRY2A2RUG3 117 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 UBXN8O00124 270 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 DYNC1I1O14576 645 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 BPY2O14599 106 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 GCM2O75603 506 aaPredicted RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 CDRT1O95170 752 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 TMEM50AO95807 157 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 MCF2P10911 925 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 CD34P28906 385 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 PBLDP30039 288 aaPredicted RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 CDKN1BP46527 198 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 SLC11A1P49279 550 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 NUTF2P61970 127 aaKnown RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 BST2Q10589 180 aaKnown RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 GK3PQ14409 553 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 CLINT1Q14677 625 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 PON2Q15165 354 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 ANKRD22Q5VYY1 191 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 ARL9Q6T311 187 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 BRD3OSQ6XYD6 125 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 TAS2R42Q7RTR8 314 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 NANOGNBQ7Z5D8 188 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 CALHM1Q8IU99 346 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 PSTKQ8IV42 348 aaKnown RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 PRSS58Q8IYP2 241 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 OR9K2Q8NGE7 335 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 RTN4IP1Q8WWV3 396 aaPredicted RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 TUBGCP3Q96CW5 907 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 NEURL3Q96EH8 262 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 C12orf42Q96LP6 360 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 FMO2Q99518 471 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF717Q9BY31 904 aaPredicted RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 METTL7AQ9H8H3 244 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 FAM49BQ9NUQ9 324 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 UVRAGQ9P2Y5 699 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 TRIM64CA6NLI5 447 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 IGKV1D-16P01601 117 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 HLA-DQA1P01909 254 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 APCSP02743 223 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 UBTFL6P0CB48 400 aaPredicted RBP1.7□□□□□ -2.14
VPS13C-207ENST00000558919 CCNB1P14635 433 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 KITLGP21583 273 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 CXCL12P48061 93 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 TPMTP51580 245 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF138P52744 262 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 MEF2BQ02080 365 aaPredicted RBP1.7□□□□□ -2.14
VPS13C-207ENST00000558919 PPIL2Q13356 520 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 SLC39A6Q13433 755 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 RGNQ15493 299 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 SMUG1Q53HV7 270 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 THEM4Q5T1C6 240 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 DNAJC24Q6P3W2 148 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 CDR2LQ86X02 465 aaPredicted RBP1.7□□□□□ -2.14
VPS13C-207ENST00000558919 OR2L3Q8NG85 312 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 OR4F6Q8NGB9 312 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 OR1L6Q8NGR2 347 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 OR10R2Q8NGX6 335 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 SLC2A14Q8TDB8 520 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 TIMM29Q9BSF4 260 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 RABL2BQ9UNT1 228 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 RRP15Q9Y3B9 282 aaKnown RBP1.7□□□□□ -2.14
VPS13C-207ENST00000558919 SHROOM3Q8TF72 1996 aa1.7□□□□□ -2.14
VPS13C-207ENST00000558919 CCDC169A6NNP5 214 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SPECC1L-ADORA2AF8WAN1 911 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 K7EM74 188 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 AP3B1O00203 1094 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 AIFM1O95831 613 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 CD74P04233 296 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 CRYGBP07316 175 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 CT62P0C5K7 136 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 RAB3BP20337 219 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 DTYMKP23919 212 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 CASP14P31944 242 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 MAS1LP35410 378 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 PRRX1P54821 245 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 PLP1P60201 277 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 KCNJ2P63252 427 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF616Q08AN1 781 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 PIGHQ14442 188 aaPredicted RBP1.69□□□□□ -2.14
VPS13C-207ENST00000558919 ZSCAN26Q16670 478 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SPECC1LQ69YQ0 1117 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 UNQ9165/PRO28630Q6UXU0 137 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 ZYG11AQ6WRX3 759 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 FAM228AQ86W67 206 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SLC22A9Q8IVM8 553 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 ZNF547Q8IVP9 402 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 CDH26Q8IXH8 852 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 HSD17B11Q8NBQ5 300 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SDR9C7Q8NEX9 313 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 OR10J6PQ8NGY7 276 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 OR8U1Q8NH10 309 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 AKR7LQ8NHP1 331 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 KCNG3Q8TAE7 436 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 LINC01560Q8TB33 94 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 C17orf50Q8WW18 174 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 SEH1LQ96EE3 360 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 PLIN2Q99541 437 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 ETNK2Q9NVF9 386 aa1.69□□□□□ -2.14
VPS13C-207ENST00000558919 NMRK1Q9NWW6 199 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms