RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 PPP1R8Q12972 351 aaKnown RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 PTCHD4Q6ZW05 846 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 GNPDA2Q8TDQ7 276 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 C11orf40Q8WZ69 217 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 CLPTM1LQ96KA5 538 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 POM121L2Q96KW2 1035 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 SAMD8Q96LT4 415 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 GPX7Q96SL4 187 aaPredicted RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 IFT27Q9BW83 186 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 MS4A5Q9H3V2 200 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 EIF3KQ9UBQ5 218 aaKnown RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 COA3Q9Y2R0 106 aaPredicted RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 TIMM10BQ9Y5J6 103 aa13.13□□□□□ -0.31
RPL28-207ENST00000558815 FN1P02751 2386 aaKnown RBP13.13□□□□□ -0.31
RPL28-207ENST00000558815 NSD1Q96L73 2696 aaPredicted RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 TCRBV5S2A0A599 114 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 VWC2LB2RUY7 222 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 TNFRSF11BO00300 401 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 TLX2O43763 284 aaPredicted RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 DOK2O60496 412 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 MPZL1O95297 269 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 GPANK1O95872 356 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 T-ENOLP0DO92 83 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 APEHP13798 732 aaKnown RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 ZNF16P17020 682 aaPredicted RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 FPR3P25089 353 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 WNT5AP41221 380 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 CDKN2AP42771 156 aaKnown RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 DBPQ10586 325 aaPredicted RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 MTX3Q5HYI7 312 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 JAZF1Q86VZ6 243 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 ZNF101Q8IZC7 436 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 ARHGAP24Q8N264 748 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 OR9Q2Q8NGE9 314 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 ABHD4Q8TB40 342 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 SNX33Q8WV41 574 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 NUAK2Q9H093 628 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 PRPF19Q9UMS4 504 aaKnown RBP13.12□□□□□ -0.31
RPL28-207ENST00000558815 POLR1DQ9Y2S0 133 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 CSPG4Q6UVK1 2322 aa13.12□□□□□ -0.31
RPL28-207ENST00000558815 ANK3Q12955 4377 aaKnown RBP13.11□□□□□ -0.31
RPL28-207ENST00000558815 A8MV72 311 aaPredicted RBP13.11□□□□□ -0.31
RPL28-207ENST00000558815 AHCYL1O43865 530 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 HPXP02790 462 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 NOS3P29474 1203 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 HTR5AP47898 357 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 MS4A2Q01362 244 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 SCRN3Q0VDG4 424 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 TRIM25Q14258 630 aaKnown RBP13.11□□□□□ -0.31
RPL28-207ENST00000558815 RFX4Q33E94 735 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 C6orf52Q5T4I8 152 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 LCN8Q6JVE9 175 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 PGBD2Q6P3X8 592 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 RFPL4BQ6ZWI9 263 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 ADCK1Q86TW2 530 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 ZNF786Q8N393 782 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 OR4K13Q8NH42 304 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 SLC25A40Q8TBP6 338 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 BCAS4Q8TDM0 211 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 LRGUKQ96M69 825 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 TSSK2Q96PF2 358 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 NMNAT3Q96T66 252 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 THTPAQ9BU02 230 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 MUC13Q9H3R2 512 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 FN3KQ9H479 309 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 VSX1Q9NZR4 365 aaPredicted RBP13.11□□□□□ -0.31
RPL28-207ENST00000558815 GPR160Q9UJ42 338 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 LYVE1Q9Y5Y7 322 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 TLN2Q9Y4G6 2542 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 HIVEP2P31629 2446 aa13.11□□□□□ -0.31
RPL28-207ENST00000558815 ABCA1O95477 2261 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 LRP5LA4QPB2 252 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 TPD52L2O43399 206 aaKnown RBP13.1□□□□□ -0.31
RPL28-207ENST00000558815 SGCEO43556 437 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 NCR1O76036 304 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 RENP00797 406 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 IGHV4-31P0DP07 118 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 ZNF250P15622 560 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 GCH1P30793 250 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 MAGEB1P43366 347 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 GSSP48637 474 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 TSPAN31Q12999 210 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 FAM98BQ52LJ0 330 aaKnown RBP13.1□□□□□ -0.31
RPL28-207ENST00000558815 CLEC12AQ5QGZ9 265 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 ELFN2Q5R3F8 820 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 CYB5R2Q6BCY4 276 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 C1orf94Q6P1W5 598 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 TMEM154Q6P9G4 183 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 DNM1P34Q6PK57 102 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 ZNF620Q6ZNG0 422 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 TRPM8Q7Z2W7 1104 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 GLB1L2Q8IW92 636 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 ZNF540Q8NDQ6 660 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 GTF3AQ92664 365 aaKnown RBP13.1□□□□□ -0.31
RPL28-207ENST00000558815 OR2J1Q9GZK6 312 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 EGLN3Q9H6Z9 239 aa13.1□□□□□ -0.31
RPL28-207ENST00000558815 SRA1Q9HD15 236 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms