RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 MDS2Q8NDY4 140 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 OR2M7Q8NG81 312 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 OR10AC1Q8NH08 325 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 OR52N5Q8NH56 324 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 RNF128Q8TEB7 428 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 DERL3Q96Q80 235 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 SMAD5Q99717 465 aaKnown RBP11.5□□□□□ -0.57
SMAD3-207ENST00000558763 TTYH2Q9BSA4 534 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF703Q9H7S9 590 aaPredicted RBP11.5□□□□□ -0.57
SMAD3-207ENST00000558763 ELOVL3Q9HB03 270 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 B3GAT2Q9NPZ5 323 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 KLHL9Q9P2J3 617 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
SMAD3-207ENST00000558763 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
SMAD3-207ENST00000558763 ACOD1A6NK06 481 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF879B4DU55 563 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 MKRN2OSH3BPM6 223 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 K7EM74 188 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 SMAD9O15198 467 aaKnown RBP11.49□□□□□ -0.57
SMAD3-207ENST00000558763 HPGDSO60760 199 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 AQP8O94778 261 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 IGHG1P01857 330 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 PDGFAP04085 211 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF43P17038 809 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 ENPP1P22413 925 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 MFGE8Q08431 387 aaPredicted RBP11.49□□□□□ -0.57
SMAD3-207ENST00000558763 EIF2B1Q14232 305 aaKnown RBP11.49□□□□□ -0.57
SMAD3-207ENST00000558763 WDR38Q5JTN6 314 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 THEM4Q5T1C6 240 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 LRFN4Q6PJG9 635 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 IGFL2Q6UWQ7 119 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 PAMR1Q6UXH9 720 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 ASB18Q6ZVZ8 466 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 GLB1L2Q8IW92 636 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 ZIC4Q8N9L1 334 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 IL17RDQ8NFM7 739 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 C11orf40Q8WZ69 217 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 NSMAFQ92636 917 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 HAS2Q92819 552 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 CEP19Q96LK0 163 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 NOX4Q9NPH5 578 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 ABCB10Q9NRK6 738 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 COMMD3Q9UBI1 195 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 LRP12Q9Y561 859 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 PCDHGA9Q9Y5G4 932 aaKnown RBP11.49□□□□□ -0.57
SMAD3-207ENST00000558763 DNAJC13O75165 2243 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 MAP1BP46821 2468 aaKnown RBP11.49□□□□□ -0.57
SMAD3-207ENST00000558763 PKD1L2Q7Z442 2459 aa11.49□□□□□ -0.57
SMAD3-207ENST00000558763 hCG_2014768A0A024R1R8 64 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 LOC110117498-PIK3R3F6TDL0 507 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 EIF1BO60739 113 aaKnown RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 MYL9P24844 172 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 TNFSF10P50591 281 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 SUCLG1P53597 346 aaKnown RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 WIPI1Q5MNZ9 446 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CREB3L2Q70SY1 520 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 GALNTL5Q7Z4T8 443 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 LINC00346Q8IVM7 164 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 TMEM123Q8N131 208 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 OR51A4Q8NGJ6 313 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 OR10S1Q8NGN2 331 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 OR14L1PQ8NHC6 308 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 SNRNP27Q8WVK2 155 aaKnown RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 PHYHIPQ92561 330 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF385AQ96PM9 386 aaKnown RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CCDC32Q9BV29 185 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 POLE4Q9NR33 117 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CYB5R1Q9UHQ9 305 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 BSNQ9UPA5 3926 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 DNPH1O43598 174 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF254O75437 659 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ARL6IP5O75915 188 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF432O94892 652 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 SP1P08047 785 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CD46P15529 392 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ATF1P18846 271 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 LAP3P28838 519 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 RFC3P40938 356 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ZNF133P52736 654 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CLRN1P58418 232 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 PPP3R1P63098 170 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CSNK2A1P68400 391 aaPredicted RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 TOMM20Q15388 145 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 PHYHD1Q5SRE7 291 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 OR7E24Q6IFN5 339 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 CORO6Q6QEF8 472 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 DCXRQ7Z4W1 244 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 OR9K2Q8NGE7 335 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 OR5AK2Q8NH90 309 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 MCHR2Q969V1 340 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 KCTD12Q96CX2 325 aaKnown RBP11.48□□□□□ -0.57
SMAD3-207ENST00000558763 ABHD17AQ96GS6 310 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 RBP7Q96R05 134 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 FAM173AQ9BQD7 235 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 FBXL3Q9UKT7 428 aa11.48□□□□□ -0.57
SMAD3-207ENST00000558763 TRBV5-7A0A0A0MS05 114 aa11.47□□□□□ -0.57
SMAD3-207ENST00000558763 ISPDA4D126 451 aa11.47□□□□□ -0.57
SMAD3-207ENST00000558763 TMEM212A6NML5 194 aa11.47□□□□□ -0.57
SMAD3-207ENST00000558763 NME2P1O60361 137 aa11.47□□□□□ -0.57
SMAD3-207ENST00000558763 VAMP5O95183 116 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 484.4 ms