RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 FHL1Q13642 323 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SF3B4Q15427 424 aaKnown RBP eCLIP3.68□□□□□ -1.82
SPG11-211ENST00000558561 STK11Q15831 433 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 GABRA6Q16445 453 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CYP51A1Q16850 503 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 TRMT5Q32P41 509 aaKnown RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 MMEL1Q495T6 779 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 HIKESHIQ53FT3 197 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CYBRD1Q53TN4 286 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ALG10BQ5I7T1 473 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 PDSS1Q5T2R2 415 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ASPHD1Q5U4P2 390 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CARD17Q5XLA6 110 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 TMEM225Q6GV28 225 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 C3orf33Q6P1S2 294 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 NIPAL3Q6P499 406 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 B3GLCTQ6Y288 498 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CCDC80Q76M96 950 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 BHLHA15Q7RTS1 189 aaPredicted RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 AAED1Q7RTV5 226 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SPATA21Q7Z572 469 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CPLX4Q7Z7G2 160 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 GALNT5Q7Z7M9 940 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 GPAT4Q86UL3 456 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CARM1Q86X55 608 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ARMC8Q8IUR7 673 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CPOQ8IVL8 374 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZNF100Q8IYN0 542 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MICU2Q8IYU8 434 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CLDN22Q8N7P3 220 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 LSMEM1Q8N8F7 131 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 C11orf65Q8NCR3 313 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MAPK1IP1LQ8NDC0 245 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 WFDC11Q8NEX6 87 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 OR9K2Q8NGE7 335 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 OR52N5Q8NH56 324 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MOSPD2Q8NHP6 518 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 BBS10Q8TAM1 723 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ADAMTS16Q8TE57 1224 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 TMEM255BQ8WV15 326 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CPNE4Q96A23 557 aaPredicted RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 TPD52L3Q96J77 140 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ZFP3Q96NJ6 502 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MUS81Q96NY9 551 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CCT8L2Q96SF2 557 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 GPA33Q99795 319 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ECSITQ9BQ95 431 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MED18Q9BUE0 208 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 RAD21L1Q9H4I0 556 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 UBTD1Q9HAC8 227 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 NOX3Q9HBY0 568 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MED4Q9NPJ6 270 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 MAN2C1Q9NTJ4 1040 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CALML5Q9NZT1 146 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 RIMS3Q9UJD0 308 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 SLC7A7Q9UM01 511 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 A4GNTQ9UNA3 340 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 NOSIPQ9Y314 301 aaKnown RBP3.68□□□□□ -1.82
SPG11-211ENST00000558561 IFT52Q9Y366 437 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 HDGFL3Q9Y3E1 203 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 CAPN7Q9Y6W3 813 aa3.68□□□□□ -1.82
SPG11-211ENST00000558561 ARHGAP32A7KAX9 2087 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 ELOVL7A1L3X0 281 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 SHISA9B4DS77 424 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CXCR6O00574 342 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 PLPP3O14495 311 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CASKO14936 926 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 TRAF3IP2O43734 574 aaPredicted RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 MRPL33O75394 65 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 LY6HO94772 140 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 NDUFB8O95169 186 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 IGFBP1P08833 259 aaPredicted RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 TCN1P20061 433 aaPredicted RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 PSMB1P20618 241 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 PCGF2P35227 344 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CDKN1AP38936 164 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 AQP2P41181 271 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 NR4A2P43354 598 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CLK1P49759 484 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 COPZ1P61923 177 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 SELENOWP63302 87 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 ARF1P84077 181 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 MYBPC1Q00872 1141 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 BSPH1Q075Z2 132 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 CAMK2DQ13557 499 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 MELKQ14680 651 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 PDK3Q15120 406 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 RNPS1Q15287 305 aaKnown RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 ACKR1Q16570 336 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 PGGHGQ32M88 737 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 TMEM95Q3KNT9 176 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 LRRC23Q53EV4 343 aaPredicted RBP3.67□□□□□ -1.82
SPG11-211ENST00000558561 HSP90B2PQ58FF3 399 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 NCMAPQ5T1S8 102 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 EEF1A1P5Q5VTE0 462 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 PRAMEF8Q5VWM4 474 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 PRAMEF7Q5VXH5 474 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 FBXW9Q5XUX1 488 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 GLYATQ6IB77 296 aa3.67□□□□□ -1.82
SPG11-211ENST00000558561 PAQR6Q6TCH4 344 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms