RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 DCLRE1CQ96SD1 692 aaKnown RBP13.22□□□□□ -0.29
TPM1-211ENST00000558314 MSL2Q9HCI7 577 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 CMTM6Q9NX76 183 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 TIMM10BQ9Y5J6 103 aa13.22□□□□□ -0.29
TPM1-211ENST00000558314 A6NIZ1 184 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 ZSCAN5BA6NJL1 495 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 CXCR6O00574 342 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 IGF2P01344 180 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 CST2P09228 141 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 ADRA2CP18825 462 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 MSR1P21757 451 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 RBMXP38159 391 aaKnown RBP13.21□□□□□ -0.29
TPM1-211ENST00000558314 SLC9A3P48764 834 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 ARHGDIAP52565 204 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 RAP1BP61224 184 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 PCBD1P61457 104 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 RAP1AP62834 184 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 GUCY1A3Q02108 690 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 LIPEQ05469 1076 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 SCGB2A2Q13296 93 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 FAM27BQ5VT28 67 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 C1orf94Q6P1W5 598 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 MARS2Q96GW9 593 aaKnown RBP13.21□□□□□ -0.29
TPM1-211ENST00000558314 EGLN1Q9GZT9 426 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 NKIRAS2Q9NYR9 191 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 GRHPRQ9UBQ7 328 aa13.21□□□□□ -0.29
TPM1-211ENST00000558314 A0A0G2JMP0 313 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 A0A0X1KG70 313 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 XKRYO14609 159 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 ABHD16AO95870 558 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 SERPINA1P01009 418 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 TSPAN19P0C672 248 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 EPHA1P21709 976 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 HTR5AP47898 357 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 SLC7A2P52569 658 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 LCN2P80188 198 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 IFI44LQ53G44 452 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 TMEM255AQ5JRV8 349 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 DCAF12L2Q5VW00 463 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 FAM205BPQ63HN1 556 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.2□□□□□ -0.3
TPM1-211ENST00000558314 OFCC1Q8IZS5 231 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 OR4M2Q8NGB6 313 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 FAM162AQ96A26 154 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 HSH2DQ96JZ2 352 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 C4orf45Q96LM5 186 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 ADAM18Q9Y3Q7 739 aa13.2□□□□□ -0.3
TPM1-211ENST00000558314 NPIPB13A6NJU9 1138 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 C12orf71A8MTZ7 269 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 NPIPB4C9JG80 1138 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 DOK2O60496 412 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 AVPP01185 164 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 IGHV2-5P01817 119 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 SCG5P05408 212 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 SBK2P0C263 348 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 NCK1P16333 377 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 CENPAP49450 140 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 MMP15P51511 669 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 TNFAIP6P98066 277 aaPredicted RBP13.19□□□□□ -0.3
TPM1-211ENST00000558314 PRKCDQ05655 676 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 ENDOGQ14249 297 aaKnown RBP13.19□□□□□ -0.3
TPM1-211ENST00000558314 SPRNQ5BIV9 151 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 FAM209AQ5JX71 171 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 ARL9Q6T311 187 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 ARPINQ7Z6K5 226 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 PEG10Q86TG7 708 aaKnown RBP13.19□□□□□ -0.3
TPM1-211ENST00000558314 CYP4Z1Q86W10 505 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 LRRC75AQ8NAA5 344 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 FNDC8Q8TC99 324 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 Q96M85 177 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 POLE4Q9NR33 117 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 CYSLTR2Q9NS75 346 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 MAN2C1Q9NTJ4 1040 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 PCDHB10Q9UN67 800 aa13.19□□□□□ -0.3
TPM1-211ENST00000558314 A0A087WUU8 490 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 FFAR1O14842 300 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 IGHMP01871 453 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 COX4I1P13073 169 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 GSTM3P21266 225 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 MTX3Q5HYI7 312 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 FGD3Q5JSP0 725 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 MBNL2Q5VZF2 373 aaKnown RBP13.18□□□□□ -0.3
TPM1-211ENST00000558314 C1orf229Q6ZS94 237 aaPredicted RBP13.18□□□□□ -0.3
TPM1-211ENST00000558314 SLC15A3Q8IY34 581 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 OR2Z1Q8NG97 314 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 RP9Q8TA86 221 aaKnown RBP13.18□□□□□ -0.3
TPM1-211ENST00000558314 ST7LQ8TDW4 575 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 ACOT11Q8WXI4 607 aaPredicted RBP13.18□□□□□ -0.3
TPM1-211ENST00000558314 C22orf15Q8WYQ4 148 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 RASD2Q96D21 266 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 FAM46AQ96IP4 442 aaKnown RBP13.18□□□□□ -0.3
TPM1-211ENST00000558314 ZNF570Q96NI8 536 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 NDEL1Q9GZM8 345 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 POFUT1Q9H488 388 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 C7orf69Q9H7B7 122 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 DCAF16Q9NXF7 216 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 IL20RAQ9UHF4 553 aa13.18□□□□□ -0.3
TPM1-211ENST00000558314 NDRG4Q9ULP0 352 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms