RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TPT1P8Q9HAU6 139 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TMEM165Q9HC07 324 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 BCL2L10Q9HD36 194 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 TUBG2Q9NRH3 451 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 DCAF16Q9NXF7 216 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 IL19Q9UHD0 177 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 SLC13A4Q9UKG4 626 aa4.33□□□□□ -1.72
SPG11-208ENST00000558155 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.33□□□□□ -1.72
SPG11-208ENST00000558155 hCG_2014768A0A024R1R8 64 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 LOC100509620A0A075B734 347 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 SCO2A0A1W2PP80 73 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 TLDC2A0PJX2 215 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 LRRC30A6NM36 301 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 CENPBD1B2RD01 187 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 LRRN3E7EW58 273 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 GPR137BO60478 399 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 SHBGP04278 402 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 IL6P05231 212 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 MMP7P09237 267 aaPredicted RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 FAM153BP0C7A2 387 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ZCCHC18P0CG32 403 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ETS2P15036 469 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 GSTM3P21266 225 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 FUT4P22083 530 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 PRKAR1BP31321 381 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 WNT5AP41221 380 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 CDKN2CP42773 168 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 GUCA1AP43080 201 aaPredicted RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 IER3P46695 156 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 RPL14P50914 215 aaKnown RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 NME5P56597 212 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 PCBP3P57721 371 aaKnown RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 FGF12P61328 243 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 PCBD1P61457 104 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 PSG7Q13046 419 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 TAF11Q15544 211 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 OR1Q1Q15612 314 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 SGCAQ16586 387 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 RPS26P11Q5JNZ5 115 aaPredicted RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 CEP85LQ5SZL2 805 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 CD276Q5ZPR3 534 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ZNF774Q6NX45 483 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 Q6ZSV7 163 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 KRT73Q86Y46 540 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 NUDCD3Q8IVD9 361 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ZNF101Q8IZC7 436 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 FITM2Q8N6M3 262 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ATG16L2Q8NAA4 619 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 BBS10Q8TAM1 723 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 TCP10LQ8TDR4 215 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 UBLCP1Q8WVY7 318 aaPredicted RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 ITLN1Q8WWA0 313 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 LRTOMTQ8WZ04 291 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 SGCDQ92629 289 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 PTP4A1Q93096 173 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 APOPT1Q96IL0 206 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 C4orf45Q96LM5 186 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 SIGLEC11Q96RL6 698 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ZNF607Q96SK3 696 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 PCGF1Q9BSM1 259 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 TXLNGYQ9BZA5 131 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 NUF2Q9BZD4 464 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 RAD21L1Q9H4I0 556 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 RMND5AQ9H871 391 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 EVA1AQ9H8M9 152 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 NANSQ9NR45 359 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 ACOXLQ9NUZ1 547 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 NECAP2Q9NVZ3 263 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 MKS1Q9NXB0 559 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 TAS2R5Q9NYW4 299 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 SLC17A7Q9P2U7 560 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 STX18Q9P2W9 335 aaKnown RBP4.32□□□□□ -1.72
SPG11-208ENST00000558155 CLN8Q9UBY8 286 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 FAM96BQ9Y3D0 163 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 TIMM10BQ9Y5J6 103 aa4.32□□□□□ -1.72
SPG11-208ENST00000558155 A0A0B4J2E0 115 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 CENPVL3A0A0U1RRI6 287 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ZNF816-ZNF321PA0A0X1KG74 233 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 A0A1B0GX12 115 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 A0A1W2PRG6 482 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 BTBD17A6NE02 478 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 PRORSD1PA6NEY8 169 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ZNF879B4DU55 563 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 MCIDASD6RGH6 385 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 BLOC1S5-TXNDC5H3BN57 136 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 PHYHO14832 338 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ENSAO43768 121 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 XPNPEP2O43895 674 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 SPAG7O75391 227 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 SLC22A3O75751 556 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TSPAN9O75954 239 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 TOX4O94842 621 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 ZNF205O95201 554 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 FSTL3O95633 263 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 CH25HO95992 272 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 BPGMP07738 259 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 VIMP08670 466 aaKnown RBP4.31□□□□□ -1.72
SPG11-208ENST00000558155 PGA4P0DJD7 388 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 PGA3P0DJD8 388 aa4.31□□□□□ -1.72
SPG11-208ENST00000558155 NR2C1P13056 603 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms