RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GABARAPL3Q9BY60 117 aa22.18■■□□□ 1.14
SMAD6-202ENST00000557916 POU2F3Q9UKI9 436 aa22.18■■□□□ 1.14
SMAD6-202ENST00000557916 TIMM10BQ9Y5J6 103 aa22.18■■□□□ 1.14
SMAD6-202ENST00000557916 LRBAP50851 2863 aa22.18■■□□□ 1.14
SMAD6-202ENST00000557916 PRR23D1E9PI22 279 aaPredicted RBP22.17■■□□□ 1.14
SMAD6-202ENST00000557916 ATP6V1G2-DDX39BF2Z307 99 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 HLA-DQA2P01906 255 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 TFP02787 698 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 PRR23D2P0DMB1 279 aaPredicted RBP22.17■■□□□ 1.14
SMAD6-202ENST00000557916 POLR2IP36954 125 aaKnown RBP22.17■■□□□ 1.14
SMAD6-202ENST00000557916 TEKQ02763 1124 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 ZNF672Q499Z4 452 aaPredicted RBP22.17■■□□□ 1.14
SMAD6-202ENST00000557916 SLX4IPQ5VYV7 408 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 PTP4A1Q93096 173 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 SLC29A1Q99808 456 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 HCAR1Q9BXC0 346 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 PRRG3Q9BZD7 231 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 OR2H1Q9GZK4 316 aa22.17■■□□□ 1.14
SMAD6-202ENST00000557916 IGHV2OR16-5A0A0B4J2B6 119 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 IQCMA0A1B0GVH7 501 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 CYSRT1A8MQ03 144 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 HS3ST1O14792 307 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 PTHP01270 115 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 CLUP10909 449 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 CALCRP30988 508 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 RAD23AP54725 363 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 CDH11P55287 796 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 PSG4Q00888 419 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 PLBD1Q6P4A8 553 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 OR10H5Q8NGA6 315 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 AKR7LQ8NHP1 331 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 LIME1Q9H400 295 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 POLR1DQ9Y2S0 133 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 ATP23Q9Y6H3 246 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 NOTCH2Q04721 2471 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 ROS1P08922 2347 aa22.16■■□□□ 1.14
SMAD6-202ENST00000557916 AQP6Q13520 282 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 ZNF771Q7L3S4 317 aaPredicted RBP22.15■■□□□ 1.14
SMAD6-202ENST00000557916 CPOQ8IVL8 374 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 ALDH16A1Q8IZ83 802 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 SLC30A7Q8NEW0 376 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 WNT5BQ9H1J7 359 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 C1orf198Q9H425 327 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 HINT3Q9NQE9 182 aaKnown RBP22.15■■□□□ 1.14
SMAD6-202ENST00000557916 CISD1Q9NZ45 108 aaKnown RBP22.15■■□□□ 1.14
SMAD6-202ENST00000557916 ASH2LQ9UBL3 628 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 POLQO75417 2590 aa22.15■■□□□ 1.14
SMAD6-202ENST00000557916 SCRN3Q0VDG4 424 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 TRIP10Q15642 601 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 C12orf73Q69YU5 71 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 CPEB3Q8NE35 698 aaKnown RBP22.14■■□□□ 1.14
SMAD6-202ENST00000557916 OR6K6Q8NGW6 343 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 OR51V1Q9H2C8 321 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 DCLRE1BQ9H816 532 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 MRPL22Q9NWU5 206 aaKnown RBP22.14■■□□□ 1.14
SMAD6-202ENST00000557916 SPG11Q96JI7 2443 aa22.14■■□□□ 1.14
SMAD6-202ENST00000557916 HEATR1Q9H583 2144 aaKnown RBP22.14■■□□□ 1.13
SMAD6-202ENST00000557916 TVP23AA6NH52 213 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 ZNF823P16415 610 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 APEX1P27695 318 aaKnown RBP22.14■■□□□ 1.13
SMAD6-202ENST00000557916 FMO3P31513 532 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 ZIK1Q3SY52 487 aaPredicted RBP22.14■■□□□ 1.13
SMAD6-202ENST00000557916 ZNF774Q6NX45 483 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 B3GLCTQ6Y288 498 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 CXXC5Q7LFL8 322 aaKnown RBP22.14■■□□□ 1.13
SMAD6-202ENST00000557916 FBXW5Q969U6 566 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 CDADC1Q9BWV3 514 aa22.14■■□□□ 1.13
SMAD6-202ENST00000557916 E7EQL1 145 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 ZNF35P13682 527 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 APLNRP35414 380 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 BLVRAP53004 296 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 LYPD4Q6UWN0 246 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 ZNF611Q8N823 705 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 ZNF511Q8NB15 262 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 OR4F15Q8NGB8 312 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 OR1J2Q8NGS2 313 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 EDARQ9UNE0 448 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 LHFPL6Q9Y693 200 aa22.13■■□□□ 1.13
SMAD6-202ENST00000557916 AKAP6Q13023 2319 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 M0R129 80 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 PRKYO43930 277 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 GLCEO94923 617 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 CCL2P13500 99 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 STOMP27105 288 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 ADAM8P78325 824 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 HGFACQ04756 655 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 LRRC36Q1X8D7 754 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 TBC1D28Q2M2D7 210 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 KLHL12Q53G59 568 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 LINC01590Q5TEZ4 76 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 LPCAT4Q643R3 524 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 PAMR1Q6UXH9 720 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 C20orf204Q6ZNR8 217 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 GJC3Q8NFK1 279 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 GRIP2Q9C0E4 1043 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 TOR3AQ9H497 397 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 CDH20Q9HBT6 801 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 KCNG2Q9UJ96 466 aa22.12■■□□□ 1.13
SMAD6-202ENST00000557916 H0YHG0 523 aa22.11■■□□□ 1.13
SMAD6-202ENST00000557916 PRODHO43272 600 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms