RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 CXCL17Q6UXB2 119 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 UNQ9370/PRO34162Q6UXP9 181 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 C2orf66Q6UXQ4 117 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 PRSS41Q7RTY9 318 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 CDC20BQ86Y33 519 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 CRLF3Q8IUI8 442 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 ZNF565Q8N9K5 539 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 VN1R2Q8NFZ6 395 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SDR42E1Q8WUS8 393 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 C17orf50Q8WW18 174 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 ITLN1Q8WWA0 313 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SLC25A38Q96DW6 304 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 ALS2CR12Q96Q35 445 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 SH3GL3Q99963 347 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 MICU1Q9BPX6 476 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 ZNF251Q9BRH9 671 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 C7orf50Q9BRJ6 194 aaKnown RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 CNPY3Q9BT09 278 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 COPS4Q9BT78 406 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 KCNJ16Q9NPI9 418 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 RMND1Q9NWS8 449 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 FLVCR1Q9Y5Y0 555 aa2.97□□□□□ -1.93
TDP1-217ENST00000557782 CFAP65Q6ZU64 1925 aaKnown RBP2.97□□□□□ -1.93
TDP1-217ENST00000557782 GAKO14976 1311 aa2.96□□□□□ -1.93
TDP1-217ENST00000557782 USP42Q9H9J4 1324 aaKnown RBP2.96□□□□□ -1.93
TDP1-217ENST00000557782 A0A0A6YYH2 397 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 A0A0G2JLM5 398 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 TMEM213A2RRL7 107 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 A6NDN8 102 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 A6NJ64 397 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 MKRN2OSH3BPM6 223 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 H7C2Y5 167 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 CDX4O14627 284 aaPredicted RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 NUPL2O15504 423 aaKnown RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 ERI3O43414 337 aaKnown RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 DPM1O60762 260 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 MYO1DO94832 1006 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 DUSP14O95147 198 aaKnown RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 SNAPINO95295 136 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 AIFM1O95831 613 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 HPRT1P00492 218 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 GCGP01275 180 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 OR8U9P0C7N5 309 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 RAB5AP20339 215 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 GPX4P36969 197 aaPredicted RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 SERPINB8P50452 374 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 RAB7AP51149 207 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 TAS2R39P59534 338 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 MYL6P60660 151 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 TSPAN5P62079 268 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 C2orf80Q0P641 193 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 ST3GAL4Q11206 333 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 ASAH1Q13510 395 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 ZNF726P1Q15940 193 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 TAL2Q16559 108 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 OR2B11Q5JQS5 317 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 C1orf100Q5SVJ3 147 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 CPTPQ5TA50 214 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 APOBEC3HQ6NTF7 200 aaKnown RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 CD300LGQ6UXG3 332 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 MBOAT2Q6ZWT7 520 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 ABHD13Q7L211 337 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 SETD3Q86TU7 594 aaPredicted RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 CDRT4Q8N9R6 151 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 WDR31Q8NA23 367 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 OR8U1Q8NH10 309 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 MRAPQ8TCY5 172 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 APH1BQ8WW43 257 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 RCN3Q96D15 328 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 SCGB3A2Q96PL1 93 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 P2RX4Q99571 388 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 AGMATQ9BSE5 352 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 TRIM51Q9BSJ1 452 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 ADNPQ9H2P0 1102 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 PLGRKTQ9HBL7 147 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 C6orf50Q9HD87 102 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.96□□□□□ -1.94
TDP1-217ENST00000557782 IL20Q9NYY1 176 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 DHRS4-AS1Q9P1J3 65 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 VSIG4Q9Y279 399 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 ZNF256Q9Y2P7 627 aaPredicted RBP2.96□□□□□ -1.94
TDP1-217ENST00000557782 UGT2A1Q9Y4X1 527 aa2.96□□□□□ -1.94
TDP1-217ENST00000557782 TDRD15B5MCY1 1934 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 RALGAPA1Q6GYQ0 2036 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 DENND4AQ7Z401 1863 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 TRAV8-7A0A075B6U6 113 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 A0A0A6YYD5 115 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 A0A1B0GVI7 797 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ANKRD20A5PA0PJZ0 165 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 TVP23AA6NH52 213 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 ZNF726A6NNF4 738 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 E7ENQ6 273 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 K7EMT4 169 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 DFFAO00273 331 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 NME4O00746 187 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 COCHO43405 550 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 GATCO43716 136 aaKnown RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 LYPLA1O75608 230 aaPredicted RBP2.95□□□□□ -1.94
TDP1-217ENST00000557782 TRAPPC6AO75865 159 aa2.95□□□□□ -1.94
TDP1-217ENST00000557782 AMBPP02760 352 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms