RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 C4orf45Q96LM5 186 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 MAGEB18Q96M61 343 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 SH3GL1Q99961 368 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 ECSITQ9BQ95 431 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 NTN4Q9HB63 628 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 MSL2Q9HCI7 577 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 INTS9Q9NV88 658 aaKnown RBP13.48□□□□□ -0.25
SCFD1-224ENST00000557713 DCAF16Q9NXF7 216 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 UBAP1Q9NZ09 502 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 ISPDA4D126 451 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 HTR3EA5X5Y0 456 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 FXYD1O00168 92 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 PIP5K1CO60331 668 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 FOXH1O75593 365 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 IGHV2-70P01814 119 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 IGHMP01871 453 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 PCBD1P61457 104 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 PSG7Q13046 419 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 HNRNPA0Q13151 305 aaKnown RBP13.47□□□□□ -0.25
SCFD1-224ENST00000557713 CDK5R2Q13319 367 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 ZNF774Q6NX45 483 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 LRRC75AQ8NAA5 344 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 DEFB108BQ8NET1 73 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 FNDC8Q8TC99 324 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 ST7LQ8TDW4 575 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 LRRC58Q96CX6 371 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 ZNF583Q96ND8 569 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 ELOVL3Q9HB03 270 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 NPHS2Q9NP85 383 aa13.47□□□□□ -0.25
SCFD1-224ENST00000557713 POLR3KQ9Y2Y1 108 aaPredicted RBP13.47□□□□□ -0.25
SCFD1-224ENST00000557713 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 IFNA14P01570 189 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 SCG5P05408 212 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 SBK2P0C263 348 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 ARHGDIAP52565 204 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 CTXN1P60606 82 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 TNFAIP6P98066 277 aaPredicted RBP13.46□□□□□ -0.25
SCFD1-224ENST00000557713 TOP3AQ13472 1001 aaPredicted RBP13.46□□□□□ -0.25
SCFD1-224ENST00000557713 FHL1Q13642 323 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 ENDOGQ14249 297 aaKnown RBP13.46□□□□□ -0.25
SCFD1-224ENST00000557713 ZMAT1Q5H9K5 638 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 MTX3Q5HYI7 312 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 SYT9Q86SS6 491 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 C10orf82Q8WW14 230 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 BPIFA2Q96DR5 249 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 DCLRE1CQ96SD1 692 aaKnown RBP13.46□□□□□ -0.25
SCFD1-224ENST00000557713 ZNF747Q9BV97 191 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 MMP26Q9NRE1 261 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 DDX28Q9NUL7 540 aaKnown RBP13.46□□□□□ -0.25
SCFD1-224ENST00000557713 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 A4GNTQ9UNA3 340 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 PPIAL4AQ9Y536 164 aa13.46□□□□□ -0.25
SCFD1-224ENST00000557713 TANC2Q9HCD6 1990 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 ARHGAP32A7KAX9 2087 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 A0A0G2JND7 137 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 EDF1O60869 148 aaKnown RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 NPPAP01160 153 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 HKR1P10072 659 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 IFI30P13284 250 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 MSR1P21757 451 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 FUT4P22083 530 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 KDELR2P33947 212 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 RBMXP38159 391 aaKnown RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 GUCA1AP43080 201 aaPredicted RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 SLC6A9P48067 706 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 ST3GAL3Q11203 375 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 CYBRD1Q53TN4 286 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 FAM205BPQ63HN1 556 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 ERICH5Q6P6B1 374 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 ARL9Q6T311 187 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 ZER1Q7Z7L7 766 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 IGFN1Q86VF2 1251 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 LRRC28Q86X40 367 aaPredicted RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF283Q8N7M2 679 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 SIGLECL1Q8N7X8 197 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 POP5Q969H6 163 aaKnown RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 SAMD8Q96LT4 415 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 SIKE1Q9BRV8 207 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 WACQ9BTA9 647 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 POFUT1Q9H488 388 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 PATZ1Q9HBE1 687 aaKnown RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 TMEM106BQ9NUM4 274 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 TBCCD1Q9NVR7 557 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 PURGQ9UJV8 347 aaKnown RBP13.45□□□□□ -0.26
SCFD1-224ENST00000557713 PCDHGB1Q9Y5G3 927 aa13.45□□□□□ -0.26
SCFD1-224ENST00000557713 PKD1L1Q8TDX9 2849 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 A0A1W2PPL8 197 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 C12orf71A8MTZ7 269 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 TIMM8AO60220 97 aaPredicted RBP13.44□□□□□ -0.26
SCFD1-224ENST00000557713 COX5BP10606 129 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF12P17014 697 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 TUBG1P23258 451 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 SELENOWP63302 87 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 FOXL1Q12952 345 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 ZNF154Q13106 437 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 COQ5Q5HYK3 327 aa13.44□□□□□ -0.26
SCFD1-224ENST00000557713 KLF17Q5JT82 389 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms