RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 KCTD18Q6PI47 426 aaPredicted RBP10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 ZNF584Q8IVC4 421 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 SVBPQ8N300 66 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 INO80EQ8NBZ0 244 aaPredicted RBP10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 ASB5Q8WWX0 329 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 SLC6A7Q99884 636 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PRRT1Q99946 306 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 FAM60AQ9NP50 221 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PRMT8Q9NR22 394 aaPredicted RBP10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PCDHB10Q9UN67 800 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 B9D1Q9UPM9 204 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 PLEKHA6Q9Y2H5 1048 aa10.65□□□□□ -0.7
VIPAS39-211ENST00000557658 MEGF11A6BM72 1044 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 OR2AT4A6NND4 320 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 SPARCP09486 303 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 H2AFB1P0C5Y9 115 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 GLULP15104 373 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 FSTP19883 344 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 CASRP41180 1078 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 TNFRSF4P43489 277 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 PRKXP51817 358 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 CAPZA1P52907 286 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 ATP1B3P54709 279 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 ADAM8P78325 824 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 ELOCQ15369 112 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM196Q5HYL7 178 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 PAPD4Q6PIY7 484 aaKnown RBP10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 LYG2Q86SG7 212 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC25A42Q86VD7 318 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 ZNF615Q8N8J6 731 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 OIT3Q8WWZ8 545 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 PPP1R14AQ96A00 147 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 CMKLR1Q99788 373 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 FAM117AQ9C073 453 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 CGGBP1Q9UFW8 167 aaPredicted RBP10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 FBXO9Q9UK97 447 aaPredicted RBP10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 KLK13Q9UKR3 277 aa10.65□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM218A2RU14 115 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 C5orf67F2Z3F1 127 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC25A12O75746 678 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 CSN2P05814 226 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ST6GAL1P15907 406 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 IGFBP3P17936 291 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ZBTB25P24278 435 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 BDKRB2P30411 391 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 RIDAP52758 137 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ROM1Q03395 351 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ARHGEF39Q8N4T4 335 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 BOLLQ8N9W6 283 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 OR1S2Q8NGQ3 325 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ADAMTS18Q8TE60 1221 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 METTL21AQ8WXB1 218 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC25A44Q96H78 314 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ASF1BQ9NVP2 202 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 SLC2A8Q9NY64 477 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 MLXQ9UH92 298 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 VSIG4Q9Y279 399 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 MRPS18BQ9Y676 258 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 OR2W5A6NFC9 320 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 FAM25EA8MYX2 175 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 SULT2B1O00204 365 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 NUDT21O43809 227 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 CD37P11049 281 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 LIPCP11150 499 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 MAOAP21397 527 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 HNRNPA2B1P22626 353 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 MAOBP27338 520 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 RORAP35398 523 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 DNASE1L1P49184 302 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 BIKQ13323 160 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 INPP5JQ15735 1006 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 NKPD1Q17RQ9 610 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 KIF26BQ2KJY2 2108 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 RNASE10Q5GAN6 216 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 OTPQ5XKR4 325 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ARMC6Q6NXE6 501 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 C3orf33Q6P1S2 294 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 HAGHLQ6PII5 290 aaPredicted RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 CATSPERDQ86XM0 798 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ARMC10Q8N2F6 343 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 JAGN1Q8N5M9 183 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 FOXN4Q96NZ1 517 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 PHB2Q99623 299 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 KXD1Q9BQD3 176 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 SEMA6CQ9H3T2 930 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 ZMAT3Q9HA38 289 aaKnown RBP10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
VIPAS39-211ENST00000557658 C5orf42Q9H799 3197 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 DCDC2BA2VCK2 349 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 TMEM235A6NFC5 223 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 C11orf98E9PRG8 122 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 GPR31O00270 319 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 EIF1AYO14602 144 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 LDLRAD4O15165 306 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 PRKNO60260 465 aaPredicted RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 UTS2O95399 124 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 DCNP07585 359 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 EIF1AXP47813 144 aaKnown RBP10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 CXADRP78310 365 aa10.63□□□□□ -0.71
VIPAS39-211ENST00000557658 MFGE8Q08431 387 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms