RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 LINC00346Q8IVM7 164 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 APH1BQ8WW43 257 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 H2AFY2Q9P0M6 372 aaPredicted RBP13.32□□□□□ -0.28
NEDD1-213ENST00000557644 MOKQ9UQ07 419 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 LHFPL6Q9Y693 200 aa13.32□□□□□ -0.28
NEDD1-213ENST00000557644 HECTD1Q9ULT8 2610 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 SELENOFO60613 162 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 CST2P09228 141 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 EPXP11678 715 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 CDH11P55287 796 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 ADAM8P78325 824 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 MEPCEQ7L2J0 689 aaKnown RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 ERI1Q8IV48 349 aaKnown RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 CNIH3Q8TBE1 160 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 RNF121Q9H920 327 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 OBP2BQ9NPH6 170 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 POLR1DQ9Y2S0 133 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 CELSR2Q9HCU4 2923 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 CENPEQ02224 2701 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 SIAH2O43255 324 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 WNT11O96014 354 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 HRGP04196 525 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 MRPL3P09001 348 aaKnown RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 NAA10P41227 235 aaPredicted RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 ISL1P61371 349 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 LSM6P62312 80 aaKnown RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 MAD2L1BPQ15013 274 aaPredicted RBP13.31□□□□□ -0.28
NEDD1-213ENST00000557644 SLC36A2Q495M3 483 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 SLC35D3Q5M8T2 416 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 USP51Q70EK9 711 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 TIGD4Q8IY51 512 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 CCDC36Q8IYA8 594 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 OR10H5Q8NGA6 315 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF75AQ96N20 296 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 SPOCK3Q9BQ16 436 aa13.31□□□□□ -0.28
NEDD1-213ENST00000557644 RTTNQ86VV8 2226 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF593O00488 134 aaPredicted RBP13.3□□□□□ -0.28
NEDD1-213ENST00000557644 RER1O15258 196 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 WBP4O75554 376 aaKnown RBP13.3□□□□□ -0.28
NEDD1-213ENST00000557644 UBL3O95164 117 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 APOL3O95236 402 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF823P16415 610 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 PEX19P40855 299 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 IDH3GP51553 393 aaPredicted RBP13.3□□□□□ -0.28
NEDD1-213ENST00000557644 NUDT6P53370 316 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 PSG4Q00888 419 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 SMN1Q16637 294 aaKnown RBP13.3□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF584Q8IVC4 421 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 GID4Q8IVV7 300 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 AKR7LQ8NHP1 331 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 NANOS1Q8WY41 292 aaKnown RBP13.3□□□□□ -0.28
NEDD1-213ENST00000557644 KCNN2Q9H2S1 579 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 AMBNQ9NP70 447 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 CCNB1IP1Q9NPC3 277 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 CYB5R1Q9UHQ9 305 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 CADP27708 2225 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 C12orf71A8MTZ7 269 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 M0R1B8 84 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 IGKV3-15P01624 115 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 SPARCP09486 303 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 HCCSP53701 268 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 RAB39AQ14964 217 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 OCLNQ16625 522 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 SLC25A30Q5SVS4 291 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 OR6N2Q8NGY6 317 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 INTS14Q96SY0 518 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 CDADC1Q9BWV3 514 aa13.3□□□□□ -0.28
NEDD1-213ENST00000557644 SLC22A31A6NKX4 558 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 CASKO14936 926 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 CBR1P16152 277 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 CRYGSP22914 178 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 HTR1FP30939 366 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 ENTPD1P49961 510 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 IL18R1Q13478 541 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 AQP6Q13520 282 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 PABPC1L2AQ5JQF8 200 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 SLC18B1Q6NT16 456 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF774Q6NX45 483 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 DPY19L4Q7Z388 723 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 C8orf59Q8N0T1 100 aaPredicted RBP13.29□□□□□ -0.28
NEDD1-213ENST00000557644 CPEB3Q8NE35 698 aaKnown RBP13.29□□□□□ -0.28
NEDD1-213ENST00000557644 FAM222BQ8WU58 562 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 ZNF184Q99676 751 aaPredicted RBP13.29□□□□□ -0.28
NEDD1-213ENST00000557644 OR2H1Q9GZK4 316 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 WNT5BQ9H1J7 359 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 MARCH7Q9H992 704 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 ABCA4P78363 2273 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 IGHV1-18A0A0C4DH31 117 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 MPZL2O60487 215 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 RAB36O95755 333 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 BLVRAP53004 296 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 TMEM154Q6P9G4 183 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 SHFQ7M4L6 423 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 SETD9Q8NE22 299 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 CLN6Q9NWW5 311 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 KCNG2Q9UJ96 466 aa13.29□□□□□ -0.28
NEDD1-213ENST00000557644 TIMM10BQ9Y5J6 103 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms