RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 NSA2O95478 260 aaKnown RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 HOXB2P14652 356 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 GDI1P31150 447 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 AKT2P31751 481 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 RORAP35398 523 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 CCR4P51679 360 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 RIDAP52758 137 aaKnown RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 CD226Q15762 336 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 TMED4Q7Z7H5 227 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 SLC25A42Q86VD7 318 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 BPIFB2Q8N4F0 458 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 C19orf47Q8N9M1 422 aaKnown RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 RELL2Q8NC24 303 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 MARC2Q969Z3 335 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 ZBTB8AQ96BR9 441 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 KTI12Q96EK9 354 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 VRK1Q99986 396 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-232ENST00000557487 NDRG3Q9UGV2 375 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 B9D1Q9UPM9 204 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 CLDN16Q9Y5I7 305 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 SCN2AQ99250 2005 aa14.68□□□□□ -0.06
SHMT2-232ENST00000557487 C2orf16Q68DN1 1984 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 TRAV36DV7A0A075B6V5 113 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 A0A1W2PQF6 199 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 MEIS3P1A6NDR6 274 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 H7C1C5 153 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 SIGLEC6O43699 453 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 SCGNO76038 276 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 IL2RAP01589 272 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 PPICP45877 212 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 LCN6P62502 163 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 DEFA5Q01523 94 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 SNTB1Q13884 538 aaKnown RBP14.67□□□□□ -0.06
SHMT2-232ENST00000557487 NNATQ16517 81 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 C1orf100Q5SVJ3 147 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF627Q7L945 461 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 MAMDC2Q7Z304 686 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-232ENST00000557487 LYG2Q86SG7 212 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 CATSPERDQ86XM0 798 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF584Q8IVC4 421 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 BPIFCQ8NFQ6 507 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 OR1J2Q8NGS2 313 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF563Q8TA94 476 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 ASB5Q8WWX0 329 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 PDCD10Q9BUL8 212 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 SLC6A17Q9H1V8 727 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 GAREM1Q9H706 876 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 VSX1Q9NZR4 365 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-232ENST00000557487 NOP16Q9Y3C1 178 aaKnown RBP14.67□□□□□ -0.06
SHMT2-232ENST00000557487 HS3ST3A1Q9Y663 406 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 EML5Q05BV3 1969 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 BRWD1Q9NSI6 2320 aa14.67□□□□□ -0.06
SHMT2-232ENST00000557487 LOC390937A0A1W2PQ73 354 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 PRSS37A4D1T9 235 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 OR6A2O95222 327 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 UTS2O95399 124 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 BGLAPP02818 100 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 PRKACAP17612 351 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ACHEP22303 614 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 DLSTP36957 453 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 LUMP51884 338 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 PMPCAQ10713 525 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 MELKQ14680 651 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ELOCQ15369 112 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ATRAIDQ6UW56 229 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 OR2W3Q7Z3T1 314 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 LINC00518Q8N0U6 118 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 GALNT16Q8N428 558 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 METTL21AQ8WXB1 218 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 TAAR8Q969N4 342 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 AMELYQ99218 206 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 PHF7Q9BWX1 381 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 TINAGL1Q9GZM7 467 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 METTL21EPA6NDL7 271 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 NUPL2O15504 423 aaKnown RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ATG12O94817 140 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 HLA-AP01891 365 aaKnown RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 HLA-DQA2P01906 255 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ISG15P05161 165 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ST6GAL1P15907 406 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 TBPP20226 339 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ZBTB25P24278 435 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 RPL27P61353 136 aaKnown RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 PPIAP62937 165 aaKnown RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 SGCBQ16585 318 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ODF4Q2M2E3 257 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 GLYATL3Q5SZD4 288 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 PAPD4Q6PIY7 484 aaKnown RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 C17orf107Q6ZR85 190 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ARMC10Q8N2F6 343 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 SVBPQ8N300 66 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ZSCAN1Q8NBB4 408 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 INO80EQ8NBZ0 244 aaPredicted RBP14.66□□□□□ -0.06
SHMT2-232ENST00000557487 THAP6Q8TBB0 222 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 STK35Q8TDR2 534 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 MITD1Q8WV92 249 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 SLC46A1Q96NT5 459 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 CDC6Q99741 560 aa14.66□□□□□ -0.06
SHMT2-232ENST00000557487 ZNF471Q9BX82 626 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms