RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 RBMS3Q6XE24 437 aaKnown RBP11.87□□□□□ -0.51
SLIRP-210ENST00000557431 DOK3Q7L591 496 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 LRRC8CQ8TDW0 803 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 MPP4Q96JB8 637 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 ZNF696Q9H7X3 374 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 NTN4Q9HB63 628 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 INTS9Q9NV88 658 aaKnown RBP11.87□□□□□ -0.51
SLIRP-210ENST00000557431 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 SH3GLB1Q9Y371 365 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
SLIRP-210ENST00000557431 IGHV3-64DA0A0J9YX35 117 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 ZNF12P17014 697 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 MDKP21741 143 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 GATA3P23771 443 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 ATP4BP51164 291 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 SRSF4Q08170 494 aaKnown RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 PSG7Q13046 419 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 NRN1LQ496H8 165 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 PDLIM3Q53GG5 364 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 MTX3Q5HYI7 312 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 TREML4Q6UXN2 200 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 Q6ZR03 302 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 PATL1Q86TB9 770 aaKnown RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 ITLN1Q8WWA0 313 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 DYDC1Q8WWB3 177 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 POP5Q969H6 163 aaKnown RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 EGLN1Q9GZT9 426 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 PCDHAC1Q9H158 963 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 KAT8Q9H7Z6 458 aaKnown RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 PATZ1Q9HBE1 687 aaKnown RBP11.86□□□□□ -0.51
SLIRP-210ENST00000557431 EMC7Q9NPA0 242 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 TMEM106BQ9NUM4 274 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 KLHL21Q9UJP4 597 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 NDUFAF1Q9Y375 327 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 INSIG2Q9Y5U4 225 aa11.86□□□□□ -0.51
SLIRP-210ENST00000557431 ANGPT2O15123 496 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 TGDSO95455 350 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 IGHMP01871 453 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 GZMMP51124 257 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 SLC3A1Q07837 685 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 ENDOGQ14249 297 aaKnown RBP11.85□□□□□ -0.51
SLIRP-210ENST00000557431 ZMYND11Q15326 602 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 VMACQ2NL98 169 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 RABL3Q5HYI8 236 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 LEG1Q6P5S2 330 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 TREML1Q86YW5 311 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 OR2Z1Q8NG97 314 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 ZNF420Q8TAQ5 688 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-210ENST00000557431 TMEM239Q8WW34 195 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 SLC7A6Q92536 515 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 C4orf45Q96LM5 186 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 SIGLEC11Q96RL6 698 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 TXNIPQ9H3M7 391 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 TNFRSF19Q9NS68 423 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 ZNF446Q9NWS9 450 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 PLEK2Q9NYT0 353 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 RIMS3Q9UJD0 308 aa11.85□□□□□ -0.51
SLIRP-210ENST00000557431 TRAV27A0A087WT01 109 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 CD55P08174 381 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 ADH4P08319 380 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 TSPAN19P0C672 248 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 SLC6A9P48067 706 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 CTXN1P60606 82 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 ALG10Q5BKT4 473 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 FAM27BQ5VT28 67 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 C1orf94Q6P1W5 598 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 OR5AS1Q8N127 324 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 DPP10Q8N608 796 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 MAGEB18Q96M61 343 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 DIRC2Q96SL1 478 aa11.84□□□□□ -0.51
SLIRP-210ENST00000557431 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
SLIRP-210ENST00000557431 TRAV40A0A0B4J280 105 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 CENPBD1B2RD01 187 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 F5H0A9 414 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-210ENST00000557431 FBP2O00757 339 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 ABHD16AO95870 558 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 CST2P09228 141 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 THRBP10828 461 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 IFI30P13284 250 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 CD80P33681 288 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 YAP1P46937 504 aaKnown RBP11.83□□□□□ -0.52
SLIRP-210ENST00000557431 PRSS12P56730 875 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 BTG1P62324 171 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 CDK5R2Q13319 367 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 SLC9A3R2Q15599 337 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 MIDNQ504T8 468 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 FAM201AQ5SY85 155 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 HDDC2Q7Z4H3 204 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 PARP8Q8N3A8 854 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 KLHL36Q8N4N3 616 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 ZNF283Q8N7M2 679 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 OR2V2Q96R30 315 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 MS4A7Q9GZW8 240 aaPredicted RBP11.83□□□□□ -0.52
SLIRP-210ENST00000557431 SMURF2Q9HAU4 748 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 CYSLTR2Q9NS75 346 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 RHCGQ9UBD6 479 aa11.83□□□□□ -0.52
SLIRP-210ENST00000557431 ZDHHC8Q9ULC8 765 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms