RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OR52E2Q8NGJ4 325 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 AKR7LQ8NHP1 331 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 TEX47Q8TBZ9 253 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 SLCO4A1Q96BD0 722 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 NRBF2Q96F24 287 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 NMNAT3Q96T66 252 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 FEVQ99581 238 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 NIPSNAP1Q9BPW8 284 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 TSSK6Q9BXA6 273 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 BCL2L14Q9BZR8 327 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 RACGAP1Q9H0H5 632 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 SRA1Q9HD15 236 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 EIF3KQ9UBQ5 218 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 KLHL21Q9UJP4 597 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 NDRG4Q9ULP0 352 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 B9D1Q9UPM9 204 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 FKBP7Q9Y680 259 aa10.78□□□□□ -0.68
SLIRP-209ENST00000557342 CHD3Q12873 2000 aaKnown RBP10.78□□□□□ -0.68
SLIRP-209ENST00000557342 IGHV4-39P01824 125 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 ERCC1P07992 297 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-209ENST00000557342 COX5BP10606 129 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 CCL2P13500 99 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 ANXA8P13928 327 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 PPOXP50336 477 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 ERFP50548 548 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 NUDT6P53370 316 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 SELENOVP59797 346 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 GLO1Q04760 184 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 KCNMB1Q16558 191 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 CLEC12BQ2HXU8 276 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 SLC35F1Q5T1Q4 408 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 RGS7BPQ6MZT1 257 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-209ENST00000557342 UGT2A3Q6UWM9 527 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 TMEM179BQ7Z7N9 219 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 ZBTB46Q86UZ6 589 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 C1orf174Q8IYL3 243 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 OR6V1Q8N148 313 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 LNX2Q8N448 690 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 NPEPL1Q8NDH3 523 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 CPEB3Q8NE35 698 aaKnown RBP10.77□□□□□ -0.69
SLIRP-209ENST00000557342 OR8D4Q8NGM9 314 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 DNAJC9Q8WXX5 260 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.69
SLIRP-209ENST00000557342 POM121L2Q96KW2 1035 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 FOXN4Q96NZ1 517 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 PLA2G12AQ9BZM1 189 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 WNT5BQ9H1J7 359 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 EMC7Q9NPA0 242 aa10.77□□□□□ -0.69
SLIRP-209ENST00000557342 RPRD1BQ9NQG5 326 aaKnown RBP10.77□□□□□ -0.69
SLIRP-209ENST00000557342 GDF2Q9UK05 429 aaPredicted RBP10.77□□□□□ -0.69
SLIRP-209ENST00000557342 AKAP9Q99996 3911 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 IGLV1-36A0A0B4J1U3 117 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 C5orf49A4QMS7 147 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 OR6C68A6NDL8 312 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 H3BN98 237 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 SGCEO43556 437 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 GPRIN2O60269 458 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 NDUFS7O75251 213 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 TIPRLO75663 272 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 SOX14O95416 240 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 IFNGP01579 166 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 SCG5P05408 212 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 FAM157BP0CG42 384 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 FCGR1AP12314 374 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 CCNOP22674 350 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 EFNA4P52798 201 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 UCP2P55851 309 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 DSCR9P59020 149 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 SLC36A3Q495N2 470 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 ZNF774Q6NX45 483 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 SHQ1Q6PI26 577 aaKnown RBP10.76□□□□□ -0.69
SLIRP-209ENST00000557342 ARL9Q6T311 187 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 SVOPLQ8N434 492 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 PAQR4Q8N4S7 273 aaPredicted RBP10.76□□□□□ -0.69
SLIRP-209ENST00000557342 OR10H5Q8NGA6 315 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 OR2T4Q8NH00 348 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 C11orf40Q8WZ69 217 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 DUS3LQ96G46 650 aaKnown RBP10.76□□□□□ -0.69
SLIRP-209ENST00000557342 C18orf12Q96KH6 178 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 TSSK2Q96PF2 358 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 DOK1Q99704 481 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 RAB1BQ9H0U4 201 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 DYNLRB1Q9NP97 96 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 ARMC1Q9NVT9 282 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 POLR1DQ9Y2S0 133 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 AP4S1Q9Y587 144 aa10.76□□□□□ -0.69
SLIRP-209ENST00000557342 LOC100509620A0A075B734 347 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 TMEM129A0AVI4 362 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 RIIAD1A6NNX1 92 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 DCTN6O00399 190 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 SSX4O60224 188 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 DOK2O60496 412 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 MPZL1O95297 269 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 F12P00748 615 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-209ENST00000557342 HLA-DQA2P01906 255 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 TP53P04637 393 aaPredicted RBP10.75□□□□□ -0.69
SLIRP-209ENST00000557342 LCKP06239 509 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 CSF3P09919 207 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 GAAP10253 952 aa10.75□□□□□ -0.69
SLIRP-209ENST00000557342 OSMP13725 252 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms