RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 LIPAP38571 399 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 RPS27P42677 84 aaKnown RBP20.92■□□□□ 0.94
SIX4-203ENST00000556952 TAS2R43P59537 309 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 MRPS34P82930 218 aaKnown RBP20.92■□□□□ 0.94
SIX4-203ENST00000556952 NUFIP2Q7Z417 695 aaKnown RBP20.92■□□□□ 0.94
SIX4-203ENST00000556952 CLVS1Q8IUQ0 354 aaPredicted RBP20.92■□□□□ 0.94
SIX4-203ENST00000556952 ZNF100Q8IYN0 542 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 MBD3L2Q8NHZ7 208 aaPredicted RBP20.92■□□□□ 0.94
SIX4-203ENST00000556952 ZNF420Q8TAQ5 688 aaPredicted RBP20.92■□□□□ 0.94
SIX4-203ENST00000556952 HAVCR2Q8TDQ0 301 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 THEM6Q8WUY1 208 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 CDADC1Q9BWV3 514 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 GPR35Q9HC97 309 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 CYB5R1Q9UHQ9 305 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 EMC9Q9Y3B6 208 aa20.92■□□□□ 0.94
SIX4-203ENST00000556952 HIVEP3Q5T1R4 2406 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 HSPB2A8KAH6 182 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 RPL36A-HNRNPH2H7BZ11 118 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 J3QLW9 94 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 SULT1C4O75897 302 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 CPEP16870 476 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 ZNF19P17023 458 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 TGFBR2P37173 567 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 RGS6P49758 472 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 OR12D2P58182 307 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 ROR2Q01974 943 aaKnown RBP20.91■□□□□ 0.94
SIX4-203ENST00000556952 EIF2B1Q14232 305 aaKnown RBP20.91■□□□□ 0.94
SIX4-203ENST00000556952 HSPB2Q16082 182 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 TSTQ16762 297 aaKnown RBP20.91■□□□□ 0.94
SIX4-203ENST00000556952 ZNF684Q5T5D7 378 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 C1orf185Q5T7R7 199 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 GPR107Q5VW38 600 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 FOXB2Q5VYV0 432 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 KCTD18Q6PI47 426 aaPredicted RBP20.91■□□□□ 0.94
SIX4-203ENST00000556952 FAM214BQ7L5A3 538 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 VASH1Q7L8A9 365 aaPredicted RBP20.91■□□□□ 0.94
SIX4-203ENST00000556952 C9orf106Q8NAJ2 232 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 NABP1Q96AH0 204 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 FUNDC2Q9BWH2 189 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 TTTY10Q9BZA0 68 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 SLC7A10Q9NS82 523 aa20.91■□□□□ 0.94
SIX4-203ENST00000556952 ZNF587BE7ETH6 402 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 H3BSA7 217 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 TACSTD2P09758 323 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 CD36P16671 472 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 EIF2S3LQ2VIR3 472 aaKnown RBP20.9■□□□□ 0.94
SIX4-203ENST00000556952 NRN1LQ496H8 165 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 TP53I3Q53FA7 332 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 OTPQ5XKR4 325 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 GFRALQ6UXV0 394 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 LINGO2Q7L985 606 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.9■□□□□ 0.94
SIX4-203ENST00000556952 FAM220AQ7Z4H9 259 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 ABHD12BQ7Z5M8 362 aaPredicted RBP20.9■□□□□ 0.94
SIX4-203ENST00000556952 KLBQ86Z14 1044 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 OR52N5Q8NH56 324 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 UFD1Q92890 307 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 UPB1Q9UBR1 384 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 GNG8Q9UK08 70 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 POLR1DQ9Y2S0 133 aa20.9■□□□□ 0.94
SIX4-203ENST00000556952 CCDC160A6NGH7 325 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 ZNF701M0R085 212 aaPredicted RBP20.89■□□□□ 0.94
SIX4-203ENST00000556952 PRRG2O14669 202 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 KRT8P05787 483 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 EDNRAP25101 427 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 OR3A2P47893 321 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 ROM1Q03395 351 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 MRPL28Q13084 256 aaKnown RBP20.89■□□□□ 0.94
SIX4-203ENST00000556952 TPBGQ13641 420 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 CEACAM16Q2WEN9 425 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 P2RY8Q86VZ1 359 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 ANKRD13BQ86YJ7 626 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 DGCR14Q96DF8 476 aaKnown RBP20.89■□□□□ 0.94
SIX4-203ENST00000556952 FOXB1Q99853 325 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 ABHD6Q9BV23 337 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 EMC7Q9NPA0 242 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 TMEM38BQ9NVV0 291 aa20.89■□□□□ 0.94
SIX4-203ENST00000556952 PHF3Q92576 2039 aaKnown RBP20.89■□□□□ 0.94
SIX4-203ENST00000556952 METTL15A6NJ78 407 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 PRR32B1ATL7 298 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 NOL3O60936 208 aaKnown RBP20.89■□□□□ 0.93
SIX4-203ENST00000556952 LALBAP00709 142 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 GBX2P52951 348 aaPredicted RBP20.89■□□□□ 0.93
SIX4-203ENST00000556952 TMBIM6P55061 237 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 RBPJQ06330 500 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 SGCAQ16586 387 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 DCXRQ7Z4W1 244 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 OR6K3Q8NGY3 331 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 ST7LQ8TDW4 575 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 ZNF837Q96EG3 531 aaPredicted RBP20.89■□□□□ 0.93
SIX4-203ENST00000556952 PELI1Q96FA3 418 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 ZFP3Q96NJ6 502 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 OR8B4Q96RC9 309 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 TP63Q9H3D4 680 aaPredicted RBP20.89■□□□□ 0.93
SIX4-203ENST00000556952 C1orf198Q9H425 327 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 SIAEQ9HAT2 523 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 NDUFB11Q9NX14 153 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 MALT1Q9UDY8 824 aa20.89■□□□□ 0.93
SIX4-203ENST00000556952 RSL24D1Q9UHA3 163 aaKnown RBP20.89■□□□□ 0.93
SIX4-203ENST00000556952 IKZF2Q9UKS7 526 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms