RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 MRPS34P82930 218 aaKnown RBP6.31□□□□□ -1.4
SCFD1-222ENST00000556768 PRKCDQ05655 676 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 RUNX1T1Q06455 604 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 C10orf128Q5T292 105 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 ARMC4Q5T2S8 1044 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 C6orf52Q5T4I8 152 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 GLYATQ6IB77 296 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 FAM166AQ6J272 317 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 MBOAT2Q6ZWT7 520 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 ZCCHC24Q8N2G6 241 aaKnown RBP6.31□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF786Q8N393 782 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 ICA1LQ8NDH6 482 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 MOSPD2Q8NHP6 518 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF519Q8TB69 540 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 SYNPRQ8TBG9 265 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 SYT3Q9BQG1 590 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 SHARPINQ9H0F6 387 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 CDIP1Q9H305 208 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 KCNS2Q9ULS6 477 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 TIMM10BQ9Y5J6 103 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 SNX13Q9Y5W8 968 aa6.31□□□□□ -1.4
SCFD1-222ENST00000556768 TRAV27A0A087WT01 109 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 A0A087WUU8 490 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 A0A1W2PRQ8 180 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM129A0AVI4 362 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 PLSCR5A0PG75 271 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 C12orf71A8MTZ7 269 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 J3KTA2 159 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 AHCYL1O43865 530 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 SNX3O60493 162 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 LMX1BO60663 402 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 DCTN3O75935 186 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 SLC2A10O95528 541 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 TGFAP01135 160 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 H1F0P07305 194 aaKnown RBP6.3□□□□□ -1.4
SCFD1-222ENST00000556768 TSPAN19P0C672 248 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF23P17027 643 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 IFNGR2P38484 337 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 GDI2P50395 445 aaKnown RBP6.3□□□□□ -1.4
SCFD1-222ENST00000556768 CHN2P52757 468 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM33P57088 247 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 MXRA7P84157 204 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 DGCR6Q14129 220 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 PCGF3Q3KNV8 242 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 ZBED5Q49AG3 693 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 FGD3Q5JSP0 725 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 FAM27BQ5VT28 67 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 TMPRSS11FQ6ZWK6 438 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 ARIH2OSQ8N7S6 290 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 CPEB3Q8NE35 698 aaKnown RBP6.3□□□□□ -1.4
SCFD1-222ENST00000556768 FBLIM1Q8WUP2 373 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 SEPHS2Q99611 448 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 WACQ9BTA9 647 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 MRPL37Q9BZE1 423 aaKnown RBP6.3□□□□□ -1.4
SCFD1-222ENST00000556768 BPESC1Q9GZL8 116 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 TPK1Q9H3S4 243 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 DECR2Q9NUI1 292 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF224Q9NZL3 707 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 ABCD2Q9UBJ2 740 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 FZR1Q9UM11 496 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 AURKCQ9UQB9 309 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 ENPP4Q9Y6X5 453 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 COL6A5A8TX70 2615 aa6.3□□□□□ -1.4
SCFD1-222ENST00000556768 A0A1W2PPL8 197 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 C5orf49A4QMS7 147 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF561-AS1K7EIQ3 104 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 STAMBPO95630 424 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CD14P08571 375 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CCL2P13500 99 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 NCK1P16333 377 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 TCN1P20061 433 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 PCMT1P22061 227 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 GIFP27352 417 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CDAP32320 146 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ALDH3B1P43353 468 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ARHGDIAP52565 204 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF133P52736 654 aaPredicted RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 TEKQ02763 1124 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 KRTAP1-1Q07627 177 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CDK5R2Q13319 367 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF718Q3SXZ3 478 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 PABPC1L2AQ5JQF8 200 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 SAMD4BQ5PRF9 694 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 C16orf89Q6UX73 402 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF584Q8IVC4 421 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 WDFY1Q8IWB7 410 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 SLC7A13Q8TCU3 470 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 HDAC2Q92769 488 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 RDH5Q92781 318 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ZNF75AQ96N20 296 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 OR51B6Q9H340 312 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 GORASP2Q9H8Y8 452 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 CHODLQ9H9P2 273 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ELOVL3Q9HB03 270 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 DCAF13Q9NV06 445 aaKnown RBP6.29□□□□□ -1.4
SCFD1-222ENST00000556768 TMEM160Q9NX00 188 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 TAAR3PQ9P1P4 343 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 MAGEL2Q9UJ55 1249 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ADAM21Q9UKJ8 722 aa6.29□□□□□ -1.4
SCFD1-222ENST00000556768 ARL2BPQ9Y2Y0 163 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms