RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ACTA1P68133 377 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 ZNF91Q05481 1191 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 SCRN3Q0VDG4 424 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 ENDOGQ14249 297 aaKnown RBP9.86□□□□□ -0.83
FOXN3-212ENST00000556541 SLC36A2Q495M3 483 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 KLHL12Q53G59 568 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 RNLSQ5VYX0 342 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.86□□□□□ -0.83
FOXN3-212ENST00000556541 LUZP2Q86TE4 346 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 OR10H5Q8NGA6 315 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 OR6K6Q8NGW6 343 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 CNIH3Q8TBE1 160 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 ZNRF4Q8WWF5 429 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 C11orf40Q8WZ69 217 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 HSD17B8Q92506 261 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 CNN2Q99439 309 aaKnown RBP9.86□□□□□ -0.83
FOXN3-212ENST00000556541 KCNN2Q9H2S1 579 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 C1orf198Q9H425 327 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 WDR76Q9H967 626 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 CCNB1IP1Q9NPC3 277 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 ZNF224Q9NZL3 707 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 PSORS1C1Q9UIG5 152 aa9.86□□□□□ -0.83
FOXN3-212ENST00000556541 SPTBN1Q01082 2364 aaKnown RBP9.86□□□□□ -0.83
FOXN3-212ENST00000556541 SLC1A7O00341 560 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 LYZL6O75951 148 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 FADS2O95864 444 aaKnown RBP9.85□□□□□ -0.83
FOXN3-212ENST00000556541 IGHA1P01876 353 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 OR2T7P0C7T2 308 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 EPXP11678 715 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 B4GALT1P15291 398 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 IGFBP2P18065 325 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 DCKP27707 260 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 HOXC12P31275 282 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 GABARAPL2P60520 117 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 RPS7P62081 194 aaKnown RBP9.85□□□□□ -0.83
FOXN3-212ENST00000556541 DEGS2Q6QHC5 323 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 KLHL24Q6TFL4 600 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SLC16A14Q7RTX9 510 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 CDC20BQ86Y33 519 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SKA3Q8IX90 412 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 WDR31Q8NA23 367 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 ZNF511Q8NB15 262 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 GJC3Q8NFK1 279 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 OR2T27Q8NH04 317 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 OTOSQ8NHW6 89 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 HAVCR2Q8TDQ0 301 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SSC4DQ8WTU2 575 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 ASB17Q8WXJ9 295 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 OTULINQ96BN8 352 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 ZMYND19Q96E35 227 aaPredicted RBP9.85□□□□□ -0.83
FOXN3-212ENST00000556541 CNBD2Q96M20 576 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SIGLEC11Q96RL6 698 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 ZNF416Q9BWM5 594 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 DUSP21Q9H596 190 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SEC61A2Q9H9S3 476 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SCN3BQ9NY72 215 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 TPRKBQ9Y3C4 175 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 TIMM10BQ9Y5J6 103 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 SLC25A15Q9Y619 301 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 LHFPL6Q9Y693 200 aa9.85□□□□□ -0.83
FOXN3-212ENST00000556541 FAM90A27PA6NNH2 459 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ZNF593O00488 134 aaPredicted RBP9.84□□□□□ -0.83
FOXN3-212ENST00000556541 RAD51DO75771 328 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 PTHP01270 115 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 IGKV3-15P01624 115 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 IGLV1-44P01699 117 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 HLA-DQA2P01906 255 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 SCG5P05408 212 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 CBR1P16152 277 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ALOX5APP20292 161 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 CRHBPP24387 322 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 CDAP32320 146 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 DCTDP32321 178 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 CAPZA2P47755 286 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 NUDT6P53370 316 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 UBE2NP61088 152 aaKnown RBP9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ADAM8P78325 824 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 SLC35A2P78381 396 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ROM1Q03395 351 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 EGR3Q06889 387 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 SRSF1Q07955 248 aaKnown RBP eCLIP9.84□□□□□ -0.83
FOXN3-212ENST00000556541 FAM27E3Q08E93 113 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ECH1Q13011 328 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 SGCAQ16586 387 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 SLC18B1Q6NT16 456 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 TMEM53Q6P2H8 277 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 BCDIN3DQ7Z5W3 292 aaKnown RBP9.84□□□□□ -0.83
FOXN3-212ENST00000556541 IL17RDQ8NFM7 739 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 OR51L1Q8NGJ5 315 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ST7LQ8TDW4 575 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 MUCL1Q96DR8 90 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 LGALS12Q96DT0 336 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 RNFT2Q96EX2 444 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 MRPL48Q96GC5 212 aaKnown RBP9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ZNF75AQ96N20 296 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 ACTR6Q9GZN1 396 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 HDHD2Q9H0R4 259 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 DDX28Q9NUL7 540 aaKnown RBP9.84□□□□□ -0.83
FOXN3-212ENST00000556541 UBAP1Q9NZ09 502 aa9.84□□□□□ -0.83
FOXN3-212ENST00000556541 DIMT1Q9UNQ2 313 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms