RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 CD79AP11912 226 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 MYF6P23409 242 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 RPS27P42677 84 aaKnown RBP15.2■□□□□ 0.02
TUBB3-211ENST00000556536 CAPZA2P47755 286 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 NUDT6P53370 316 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 CDK5R2Q13319 367 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 TAB1Q15750 504 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 TIMM23BQ5SRD1 257 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 MEDAGQ5VYS4 303 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 SLC16A14Q7RTX9 510 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 THAP5Q7Z6K1 395 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 TIGD4Q8IY51 512 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 SMAP2Q8WU79 429 aaPredicted RBP15.2■□□□□ 0.02
TUBB3-211ENST00000556536 MARCH7Q9H992 704 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 B3GNT2Q9NY97 397 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 KLF2Q9Y5W3 355 aaPredicted RBP15.2■□□□□ 0.02
TUBB3-211ENST00000556536 SLC25A15Q9Y619 301 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 FBN2P35556 2912 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 ADGRG4Q8IZF6 3080 aa15.2■□□□□ 0.02
TUBB3-211ENST00000556536 SLC22A31A6NKX4 558 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 HRGP04196 525 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 MRPL3P09001 348 aaKnown RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 HOXB1P14653 301 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 HOXC12P31275 282 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 NAA10P41227 235 aaPredicted RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 BLVRAP53004 296 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 UBE2NP61088 152 aaKnown RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 LSM6P62312 80 aaKnown RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 ADAM8P78325 824 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 PIGFQ07326 219 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 LCN1P1Q5VSP4 162 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 ALKBH2Q6NS38 261 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 P2RY8Q86VZ1 359 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 ERI1Q8IV48 349 aaKnown RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 OR10H5Q8NGA6 315 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 HSD17B8Q92506 261 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 RFKQ969G6 155 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 ZC3HAV1LQ96H79 300 aaKnown RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 CNBD2Q96M20 576 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 Q96MT0 163 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 INTS14Q96SY0 518 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 C1QTNF6Q9BXI9 259 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 AMBNQ9NP70 447 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 WARS2Q9UGM6 360 aaKnown RBP15.19■□□□□ 0.02
TUBB3-211ENST00000556536 AMDHD2Q9Y303 409 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 PCDHGB5Q9Y5G0 923 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 LHFPL6Q9Y693 200 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 CSMD1Q96PZ7 3565 aa15.19■□□□□ 0.02
TUBB3-211ENST00000556536 C12orf71A8MTZ7 269 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 PRSS44E7EML9 344 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ZNF593O00488 134 aaPredicted RBP15.18■□□□□ 0.02
TUBB3-211ENST00000556536 APOL3O95236 402 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 MMP7P09237 267 aaPredicted RBP15.18■□□□□ 0.02
TUBB3-211ENST00000556536 PPP3CBP16298 524 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ZNF823P16415 610 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ZNF32P17041 273 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 IGFBP2P18065 325 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ENTPD1P49961 510 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 RIPPLY3P57055 190 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ZNF91Q05481 1191 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 GGTLC2Q14390 218 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 PPA1Q15181 289 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 CORO6Q6QEF8 472 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 SEZ6L2Q6UXD5 910 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 MDP1Q86V88 176 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 LINC00346Q8IVM7 164 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 USB1Q9BQ65 265 aaKnown RBP15.18■□□□□ 0.02
TUBB3-211ENST00000556536 MED18Q9BUE0 208 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ADGRL4Q9HBW9 690 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 HAO2Q9NYQ3 351 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 ASH2LQ9UBL3 628 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 CYB5R1Q9UHQ9 305 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 POLR1DQ9Y2S0 133 aa15.18■□□□□ 0.02
TUBB3-211ENST00000556536 OTOGQ6ZRI0 2925 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 TUBAL3A6NHL2 446 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 DENRO43583 198 aaKnown RBP15.17■□□□□ 0.02
TUBB3-211ENST00000556536 UBL3O95164 117 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 SPARCP09486 303 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 HCCSP53701 268 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 RAB1AP62820 205 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 PCK2Q16822 640 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 SLC36A2Q495M3 483 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 SLC18B1Q6NT16 456 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 SHFQ7M4L6 423 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 WFDC8Q8IUA0 241 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 CCDC36Q8IYA8 594 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 OR51G2Q8NGK0 314 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 OR6N2Q8NGY6 317 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 MUCL1Q96DR8 90 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 RNFT2Q96EX2 444 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 CNN2Q99439 309 aaKnown RBP15.17■□□□□ 0.02
TUBB3-211ENST00000556536 CDADC1Q9BWV3 514 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 KCNN2Q9H2S1 579 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 RNF121Q9H920 327 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 CCNB1IP1Q9NPC3 277 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 OBP2BQ9NPH6 170 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 NPAP1Q9NZP6 1156 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 NDRG3Q9UGV2 375 aa15.17■□□□□ 0.02
TUBB3-211ENST00000556536 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.17■□□□□ 0.02
TUBB3-211ENST00000556536 RER1O15258 196 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms