RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RFPL4BQ6ZWI9 263 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 FKBP9P1Q75LS8 142 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 OR13C2Q8NGS9 318 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 GEMIN6Q8WXD5 167 aaKnown RBP19.22■□□□□ 0.67
ACTN1-220ENST00000556433 ACOT11Q8WXI4 607 aaPredicted RBP19.22■□□□□ 0.67
ACTN1-220ENST00000556433 ELMOD3Q96FG2 381 aa19.22■□□□□ 0.67
ACTN1-220ENST00000556433 A0A087WUU8 490 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 C12orf71A8MTZ7 269 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 NGFP01138 241 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 COX4I1P13073 169 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 MSR1P21757 451 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 SLC9A3P48764 834 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 PPP1CBP62140 327 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 ENDOGQ14249 297 aaKnown RBP19.21■□□□□ 0.67
ACTN1-220ENST00000556433 TMEM255AQ5JRV8 349 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 FAM209AQ5JX71 171 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 TBPL2Q6SJ96 375 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 CBLL1Q75N03 491 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 C1orf174Q8IYL3 243 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 CCL17Q92583 94 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 RAB1CQ92928 201 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 RAB39BQ96DA2 213 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 TIMD4Q96H15 378 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 HOPXQ9BPY8 73 aaPredicted RBP19.21■□□□□ 0.67
ACTN1-220ENST00000556433 CYSLTR2Q9NS75 346 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 WIPI2Q9Y4P8 454 aa19.21■□□□□ 0.67
ACTN1-220ENST00000556433 H7C1C5 153 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 MPZL1O95297 269 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 SCG5P05408 212 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 RPL4P36578 427 aaKnown RBP19.2■□□□□ 0.66
ACTN1-220ENST00000556433 ARHGDIAP52565 204 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 SLC7A2P52569 658 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 LCN6P62502 163 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 THSD4Q6ZMP0 1018 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 MBOAT2Q6ZWT7 520 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 RRM2BQ7LG56 351 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 SYT9Q86SS6 491 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 C4orf45Q96LM5 186 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 EGLN1Q9GZT9 426 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 CCDC134Q9H6E4 229 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 ELOVL3Q9HB03 270 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 POLE4Q9NR33 117 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 GRHPRQ9UBQ7 328 aa19.2■□□□□ 0.66
ACTN1-220ENST00000556433 A0A0A6YYJ9 748 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 ZSCAN5BA6NJL1 495 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 NME4O00746 187 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 PLPP2O43688 288 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 VENTXO95231 258 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 PNPP00491 289 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 SERPINA1P01009 418 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 LIPAP38571 399 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 GPR4P46093 362 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 SCGB2A2Q13296 93 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 ZBED5Q49AG3 693 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 ARL9Q6T311 187 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 HSH2DQ96JZ2 352 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 EFCAB1Q9HAE3 211 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 EMC7Q9NPA0 242 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 G6PC2Q9NQR9 355 aa19.19■□□□□ 0.66
ACTN1-220ENST00000556433 CDC42EP2O14613 210 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 ICMTO60725 284 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 CCDC22O60826 627 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 DEAF1O75398 565 aaPredicted RBP19.18■□□□□ 0.66
ACTN1-220ENST00000556433 PRSS23O95084 383 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 CD14P08571 375 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 GSK3BP49841 420 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 TMPRSS11FQ6ZWK6 438 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 CYP4Z1Q86W10 505 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 Q96M85 177 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 WACQ9BTA9 647 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 ZNF446Q9NWS9 450 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 KLHL21Q9UJP4 597 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 ZDHHC8Q9ULC8 765 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 NDRG4Q9ULP0 352 aaKnown RBP19.18■□□□□ 0.66
ACTN1-220ENST00000556433 ADAM18Q9Y3Q7 739 aa19.18■□□□□ 0.66
ACTN1-220ENST00000556433 H3BSA7 217 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 XKRYO14609 159 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 UBOX5O94941 541 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 AVPP01185 164 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 IGHV2-5P01817 119 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 C1orf229Q6ZS94 237 aaPredicted RBP19.17■□□□□ 0.66
ACTN1-220ENST00000556433 TEX29Q8N6K0 151 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP19.17■□□□□ 0.66
ACTN1-220ENST00000556433 FAM156AQ8NDB6 213 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 FAM162AQ96A26 154 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 GAL3ST1Q99999 423 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 NMNAT1Q9HAN9 279 aaPredicted RBP19.17■□□□□ 0.66
ACTN1-220ENST00000556433 MSL2Q9HCI7 577 aa19.17■□□□□ 0.66
ACTN1-220ENST00000556433 CGGBP1Q9UFW8 167 aaPredicted RBP19.17■□□□□ 0.66
ACTN1-220ENST00000556433 LOC105371242A0A075B767 164 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 AHCYL1O43865 530 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 TIMM8AO60220 97 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-220ENST00000556433 ABHD16AO95870 558 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 ADH4P08319 380 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 ZNF26P17031 533 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-220ENST00000556433 SLC3A1Q07837 685 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 MTX3Q5HYI7 312 aa19.16■□□□□ 0.66
ACTN1-220ENST00000556433 C8orf82Q6P1X6 216 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-220ENST00000556433 ZNF771Q7L3S4 317 aaPredicted RBP19.16■□□□□ 0.66
ACTN1-220ENST00000556433 TSEN54Q7Z6J9 526 aaKnown RBP19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms