RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 ZBTB46Q86UZ6 589 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 KRTAP1-3Q8IUG1 177 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 ALDH16A1Q8IZ83 802 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 OR6V1Q8N148 313 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 LRRC18Q8N456 261 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 CPEB3Q8NE35 698 aaKnown RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 OR4F15Q8NGB8 312 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 OR5K1Q8NHB7 308 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 TSSK2Q96PF2 358 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 NMNAT3Q96T66 252 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 TRAF4Q9BUZ4 470 aaPredicted RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 TSSK6Q9BXA6 273 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 B9D1Q9UPM9 204 aa8.35□□□□□ -1.07
SRP54-210ENST00000556380 COA3Q9Y2R0 106 aaPredicted RBP8.35□□□□□ -1.07
SRP54-210ENST00000556380 H3BNX3 289 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 E2F6O75461 281 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 MPZL1O95297 269 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 SOX14O95416 240 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 GAAP10253 952 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ANXA8P13928 327 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ZNF32P17041 273 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 MSR1P21757 451 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 NR4A1P22736 598 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 FASP25445 335 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 CRABP1P29762 137 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 GATA4P43694 442 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 DAPP51397 102 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ART1P52961 327 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 PSG4Q00888 419 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 NPRL3Q12980 569 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 SLC36A2Q495M3 483 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 SLC36A3Q495N2 470 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ACSM5Q6NUN0 579 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ZNF544Q6NX49 715 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 TMEM53Q6P2H8 277 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 LEG1Q6P5S2 330 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 SPNS3Q6ZMD2 512 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 AMIGO2Q86SJ2 522 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 GLB1L2Q8IW92 636 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 C10orf67Q8IYJ2 551 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 PAQR4Q8N4S7 273 aaPredicted RBP8.34□□□□□ -1.07
SRP54-210ENST00000556380 NUP37Q8NFH4 326 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 OR2T33Q8NG76 320 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 OR52L1Q8NGH7 329 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 OR52E2Q8NGJ4 325 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ZNRF4Q8WWF5 429 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 LRTOMTQ8WZ04 291 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 C11orf40Q8WZ69 217 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 CCL19Q99731 98 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 RBM4Q9BWF3 364 aaKnown RBP8.34□□□□□ -1.07
SRP54-210ENST00000556380 ZNF416Q9BWM5 594 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 NMNAT2Q9BZQ4 307 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 RACGAP1Q9H0H5 632 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 WNT5BQ9H1J7 359 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 SRA1Q9HD15 236 aaKnown RBP8.34□□□□□ -1.07
SRP54-210ENST00000556380 EMC7Q9NPA0 242 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 CA10Q9NS85 328 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 FBXL3Q9UKT7 428 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 BAIAP2Q9UQB8 552 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 LAMP3Q9UQV4 416 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 FKBP7Q9Y680 259 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 ATP23Q9Y6H3 246 aa8.34□□□□□ -1.07
SRP54-210ENST00000556380 LOC100509620A0A075B734 347 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 RAB36O95755 333 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 GPANK1O95872 356 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 RENP00797 406 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 TFP02787 698 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 FCGR1AP12314 374 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 OSMP13725 252 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 APOBEC3AP31941 199 aaPredicted RBP8.33□□□□□ -1.08
SRP54-210ENST00000556380 THBS4P35443 961 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 FABP6P51161 128 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 SLC25A1P53007 311 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 LSM6P62312 80 aaKnown RBP8.33□□□□□ -1.08
SRP54-210ENST00000556380 HIST1H3AP68431 136 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.33□□□□□ -1.08
SRP54-210ENST00000556380 MSMPQ1L6U9 139 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 SWI5Q1ZZU3 235 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 PABPC1L2AQ5JQF8 200 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 HIST2H3PS2Q5TEC6 136 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 OTPQ5XKR4 325 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 HIST2H3AQ71DI3 136 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 LRRC75A-AS1Q8N1F1 130 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 IQCF1Q8N6M8 205 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 CYB561A3Q8NBI2 242 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 SLC37A3Q8NCC5 494 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 SDR9C7Q8NEX9 313 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 SLC26A10Q8NG04 563 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 PYDC1Q8WXC3 89 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 CENPNQ96H22 339 aaPredicted RBP8.33□□□□□ -1.08
SRP54-210ENST00000556380 POM121L2Q96KW2 1035 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 FOXN4Q96NZ1 517 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 WACQ9BTA9 647 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 BDH2Q9BUT1 245 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 GSX2Q9BZM3 304 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 OR2H1Q9GZK4 316 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 GABARAPL1Q9H0R8 117 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 ZNF442Q9H7R0 627 aa8.33□□□□□ -1.08
SRP54-210ENST00000556380 TBC1D23Q9NUY8 699 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms