RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 CD79AP11912 226 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 HLA-DOBP13765 273 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ITGA2P17301 1181 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 DNASE1P24855 282 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 AQP2P41181 271 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 GPR4P46093 362 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 CRYBA2P53672 197 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 UGT2B15P54855 530 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 FOXG1P55316 489 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 PROK1P58294 105 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 UBE2NP61088 152 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TUBA1BP68363 451 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TUBA4AP68366 448 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ARF1P84077 181 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 H3F3AP84243 136 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SPIBQ01892 262 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ROR2Q01974 943 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TGFBR3Q03167 851 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 CHRNB3Q05901 458 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 HNRNPA0Q13151 305 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 FHL3Q13643 280 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 KEAP1Q14145 624 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 MELKQ14680 651 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SLC17A1Q14916 467 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 P2RY6Q15077 328 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 PDK3Q15120 406 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 PPA1Q15181 289 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TAF11Q15544 211 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SGCAQ16586 387 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 FBXL19-AS1Q494R0 122 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ABLIM2Q6H8Q1 611 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 KLHL17Q6TDP4 642 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TFAP2EQ6VUC0 442 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 WDR88Q6ZMY6 472 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 Q6ZT83 130 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SLC35D2Q76EJ3 337 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ABHD12BQ7Z5M8 362 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 BCDIN3DQ7Z5W3 292 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 YTHDF3Q7Z739 585 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 OAFQ86UD1 273 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 IGFN1Q86VF2 1251 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 CDC20BQ86Y33 519 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 EPHX4Q8IUS5 362 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ZNF433Q8N7K0 673 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 PNLDC1Q8NA58 520 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 POMGNT2Q8NAT1 580 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SYT14Q8NB59 555 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SEMA6DQ8NFY4 1073 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 OR5J2Q8NH18 312 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 GEMIN6Q8WXD5 167 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 CCDC124Q96CT7 223 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 BPIFA2Q96DR5 249 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 MPP4Q96JB8 637 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TNFRSF13CQ96RJ3 184 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 KCNS3Q9BQ31 491 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 TMEM43Q9BTV4 400 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SF3B5Q9BWJ5 86 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 SLCO5A1Q9H2Y9 848 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ESRP2Q9H6T0 727 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 RNF121Q9H920 327 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 C12orf10Q9HB07 376 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 DCAF13Q9NV06 445 aaKnown RBP4.07□□□□□ -1.76
ATXN3-237ENST00000556274 B3GALT5Q9Y2C3 310 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 PLEKHA6Q9Y2H5 1048 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 ARFGEF3Q5TH69 2177 aa4.07□□□□□ -1.76
ATXN3-237ENST00000556274 DYSFO75923 2080 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 ITPR2Q14571 2701 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 IGKV3D-15A0A087WSY6 115 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 TRAV27A0A087WT01 109 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 FTCDNL1E5RQL4 147 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 H7C1Q1 480 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 EBAG9O00559 213 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 ARPC2O15144 300 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 OR10H3O60404 316 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 NPIPB7O75200 414 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 RBMXL2O75526 392 aaKnown RBP4.06□□□□□ -1.76
ATXN3-237ENST00000556274 LYPD3O95274 346 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 MT-ATP6P00846 226 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 THY1P04216 161 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 FABP3P05413 133 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 T-ENOLP0DO92 83 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 HSD17B1P14061 328 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 EGR1P18146 543 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 MPGP29372 298 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 RRM2P31350 389 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 ACVR1BP36896 505 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 GUCA1AP43080 201 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-237ENST00000556274 CSNK1A1P48729 337 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 RASSF2P50749 326 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 SMIM11AP58511 58 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 PRPS1P60891 318 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 ERVK-25P63136 954 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 SORDQ00796 357 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 MS4A2Q01362 244 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 PRKCDQ05655 676 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 RPL18Q07020 188 aaKnown RBP4.06□□□□□ -1.76
ATXN3-237ENST00000556274 PUDPQ08623 228 aa4.06□□□□□ -1.76
ATXN3-237ENST00000556274 PPP1R8Q12972 351 aaKnown RBP4.06□□□□□ -1.76
ATXN3-237ENST00000556274 DAZAP2Q15038 168 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms