RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 UCP2P55851 309 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 TSPAN31Q12999 210 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 ZNF770Q6IQ21 691 aaPredicted RBP17.6■□□□□ 0.41
VTI1B-205ENST00000555543 RGS7BPQ6MZT1 257 aaPredicted RBP17.6■□□□□ 0.41
VTI1B-205ENST00000555543 ZNF774Q6NX45 483 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 ZNF101Q8IZC7 436 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 GNPDA2Q8TDQ7 276 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 TSSK2Q96PF2 358 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 NUAK2Q9H093 628 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 RERGLQ9H628 205 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 DUSP13Q9UII6 198 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 TIMM10BQ9Y5J6 103 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 ABCA1O95477 2261 aa17.6■□□□□ 0.41
VTI1B-205ENST00000555543 SONP18583 2426 aaKnown RBP17.6■□□□□ 0.41
VTI1B-205ENST00000555543 CHD3Q12873 2000 aaKnown RBP17.59■□□□□ 0.41
VTI1B-205ENST00000555543 C5orf49A4QMS7 147 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 VWC2LB2RUY7 222 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 INAFM1C9JVW0 142 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 M0R233 179 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 MPZL1O95297 269 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 CLPTM1O96005 669 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 LCKP06239 509 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 CCNOP22674 350 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 PCSK6P29122 969 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 SLC6A6P31641 620 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 IFNGR2P38484 337 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 CARTPTQ16568 116 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 SLC7A6OSQ96CW6 309 aaPredicted RBP17.59■□□□□ 0.41
VTI1B-205ENST00000555543 TRIM15Q9C019 465 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 LRMDAQ9H2I8 198 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 EGLN3Q9H6Z9 239 aa17.59■□□□□ 0.41
VTI1B-205ENST00000555543 COA3Q9Y2R0 106 aaPredicted RBP17.59■□□□□ 0.41
VTI1B-205ENST00000555543 C12orf71A8MTZ7 269 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 ARPC3O15145 178 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 KHDRBS3O75525 346 aaKnown RBP17.58■□□□□ 0.4
VTI1B-205ENST00000555543 GPANK1O95872 356 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 ZNF250P15622 560 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 HIST1H1CP16403 213 aaKnown RBP17.58■□□□□ 0.4
VTI1B-205ENST00000555543 GDI2P50395 445 aaKnown RBP17.58■□□□□ 0.4
VTI1B-205ENST00000555543 PCBD1P61457 104 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 LOXL1Q08397 574 aaPredicted RBP17.58■□□□□ 0.4
VTI1B-205ENST00000555543 ALKBH6Q3KRA9 238 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 FAM98BQ52LJ0 330 aaKnown RBP17.58■□□□□ 0.4
VTI1B-205ENST00000555543 ICA1LQ8NDH6 482 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 NMNAT3Q96T66 252 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 IFT27Q9BW83 186 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 BCL2L14Q9BZR8 327 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.58■□□□□ 0.4
VTI1B-205ENST00000555543 REV1Q9UBZ9 1251 aa17.58■□□□□ 0.4
VTI1B-205ENST00000555543 IGLV3-9A0A075B6K5 115 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 IGLV1-36A0A0B4J1U3 117 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 A0A1W2PPW3 197 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 CCNB2O95067 398 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 DAOP14920 347 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 RAD52P43351 418 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 NR4A2P43354 598 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 OR2T5Q6IEZ7 315 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 LEG1Q6P5S2 330 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 RFPL4BQ6ZWI9 263 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 SYT9Q86SS6 491 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 GLB1L2Q8IW92 636 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 ADGRG5Q8IZF4 528 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 OR1J1Q8NGS3 322 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 OR2T29Q8NH02 315 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 OR4K13Q8NH42 304 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 NEU4Q8WWR8 484 aaPredicted RBP17.57■□□□□ 0.4
VTI1B-205ENST00000555543 LRGUKQ96M69 825 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 PIMREGQ9BSJ6 248 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 PLA2G12AQ9BZM1 189 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 MYOZ1Q9NP98 299 aaPredicted RBP17.57■□□□□ 0.4
VTI1B-205ENST00000555543 CDH10Q9Y6N8 788 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 U3KQV3 271 aa17.57■□□□□ 0.4
VTI1B-205ENST00000555543 LOC390937A0A1W2PQ73 354 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 NDUFS8O00217 210 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 GYG2O15488 501 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 GASTP01350 101 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 ERCC1P07992 297 aaPredicted RBP17.56■□□□□ 0.4
VTI1B-205ENST00000555543 GAAP10253 952 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 NAT2P11245 290 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 KLF3P57682 345 aaPredicted RBP17.56■□□□□ 0.4
VTI1B-205ENST00000555543 TRAP1Q12931 704 aaKnown RBP17.56■□□□□ 0.4
VTI1B-205ENST00000555543 TMEM249Q2WGJ8 235 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 TMEM255AQ5JRV8 349 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 CLEC12AQ5QGZ9 265 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 SPATA46Q5T0L3 261 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 PGM2L1Q6PCE3 622 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 JAZF1Q86VZ6 243 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 ALDH16A1Q8IZ83 802 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 AQP11Q8NBQ7 271 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 OR8D4Q8NGM9 314 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 SYNPRQ8TBG9 265 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 C11orf40Q8WZ69 217 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 FN3KQ9H479 309 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 TAAR3PQ9P1P4 343 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 ASH2LQ9UBL3 628 aa17.56■□□□□ 0.4
VTI1B-205ENST00000555543 SAMHD1Q9Y3Z3 626 aaKnown RBP17.56■□□□□ 0.4
VTI1B-205ENST00000555543 LYNX1G3V0Z9 82 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 CD5LO43866 347 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 DOK2O60496 412 aa17.55■□□□□ 0.4
VTI1B-205ENST00000555543 ICMTO60725 284 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms