RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MPZL1O95297 269 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 SCG5P05408 212 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 CBR1P16152 277 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 MYF6P23409 242 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 ENTPD1P49961 510 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 ADAM8P78325 824 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 SCRN3Q0VDG4 424 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 GSG1Q2KHT4 349 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 TMEM53Q6P2H8 277 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 SHFQ7M4L6 423 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 BCDIN3DQ7Z5W3 292 aaKnown RBP14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 TIGD4Q8IY51 512 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 LRRC18Q8N456 261 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 ZNF511Q8NB15 262 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 OR52N5Q8NH56 324 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 FAM222BQ8WU58 562 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 ZMYND19Q96E35 227 aaPredicted RBP14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 FOXN4Q96NZ1 517 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 CDADC1Q9BWV3 514 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 EMC7Q9NPA0 242 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 CCNB1IP1Q9NPC3 277 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 CRNNQ9UBG3 495 aaPredicted RBP14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 CYB5R1Q9UHQ9 305 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 POLR1DQ9Y2S0 133 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 TIMM10BQ9Y5J6 103 aa14.36□□□□□ -0.11
SPTLC2-203ENST00000554901 C19orf84I3L1E1 186 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 WBP4O75554 376 aaKnown RBP14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 CLDN1O95832 211 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 GPANK1O95872 356 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 PTHP01270 115 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 IGKV3-15P01624 115 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 HLA-HP01893 362 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 MMP7P09237 267 aaPredicted RBP14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 EPXP11678 715 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 KIR2DL3P43628 341 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 CAPZA2P47755 286 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 MTNR1AP48039 350 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 RAB1AP62820 205 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 UGT2A3Q6UWM9 527 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 GJC3Q8NFK1 279 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 APH1BQ8WW43 257 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 FBXO17Q96EF6 278 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 MNTQ99583 582 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 YIPF3Q9GZM5 350 aa14.35□□□□□ -0.11
SPTLC2-203ENST00000554901 COL12A1Q99715 3063 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 TVP23AA6NH52 213 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 CASKO14936 926 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 GOSR1O95249 250 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 RAB36O95755 333 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 THBDP07204 575 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 CD79AP11912 226 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 HIST1H3AP68431 136 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 DBPQ10586 325 aaPredicted RBP14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 MEP1BQ16820 701 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 HIST2H3PS2Q5TEC6 136 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 HIST2H3AQ71DI3 136 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 SLC16A9Q7RTY1 509 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 ERI1Q8IV48 349 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 ALDH16A1Q8IZ83 802 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 ZNF454Q8N9F8 522 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 OR2AJ1Q8NGZ0 328 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 HTRA1Q92743 480 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 PSMG3-AS1Q96PY0 264 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 CNN2Q99439 309 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 C1orf198Q9H425 327 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 RNF121Q9H920 327 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 WDR76Q9H967 626 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 ASH2LQ9UBL3 628 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 ATPIF1Q9UII2 106 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 RPL36Q9Y3U8 105 aaKnown RBP14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 LHFPL6Q9Y693 200 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 TMEM14AQ9Y6G1 99 aa14.34□□□□□ -0.11
SPTLC2-203ENST00000554901 ZNF593O00488 134 aaPredicted RBP14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 DENRO43583 198 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 IGLV1-44P01699 117 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 ZNF32P17041 273 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 CRYGSP22914 178 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 CSNK2BP67870 215 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 PLP2Q04941 152 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 CDK5R2Q13319 367 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 SLC18B1Q6NT16 456 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 SEZ6L2Q6UXD5 910 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 MEX3BQ6ZN04 569 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 C22orf34Q6ZV56 151 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 RHOUQ7L0Q8 258 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 MDP1Q86V88 176 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 OR6N2Q8NGY6 317 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 LINC01560Q8TB33 94 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 OR2H1Q9GZK4 316 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 MRPS18AQ9NVS2 196 aaKnown RBP14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 KCNN3Q9UGI6 736 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 PCDHGB1Q9Y5G3 927 aa14.33□□□□□ -0.12
SPTLC2-203ENST00000554901 ZNF503-AS2A6NEH8 195 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 SERPINA5P05154 406 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 SBK2P0C263 348 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 COX5BP10606 129 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 DBTP11182 482 aaKnown RBP14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 CXCR4P61073 352 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 LYPD4Q6UWN0 246 aa14.32□□□□□ -0.12
SPTLC2-203ENST00000554901 DPY19L4Q7Z388 723 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms