RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 MFSD2BA6NFX1 497 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 IGLON5A6NGN9 336 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 A6NJ64 397 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 IFITM5A6NNB3 132 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 A8MXK9 166 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 STMND1H3BQB6 276 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TEX46H3BTG2 121 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SULT1C2O00338 296 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RTCAO00442 366 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 IMPA2O14732 288 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ARPC3O15145 178 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 NDUFB6O95139 128 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 MELTFP08582 738 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SLC35G6P0C7Q6 338 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 UBBP0CG47 229 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 UBCP0CG48 685 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 APEHP13798 732 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RPA2P15927 270 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RAB3AP20336 220 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TBXA2RP21731 343 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SHC1P29353 583 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RORAP35398 523 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 GPR4P46093 362 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 GDI2P50395 445 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 GPR143P51810 404 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ART1P52961 327 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 PRKAG1P54619 331 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ACTBP60709 375 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 YPEL5P62699 121 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RPS27AP62979 156 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 UBA52P62987 128 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SKP1P63208 163 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ACTG1P63261 375 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 CCL7P80098 99 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 CDK3Q00526 305 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ZFP36L1Q07352 338 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 GK2Q14410 553 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 PON3Q15166 354 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ZMYND11Q15326 602 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RBMS2Q15434 407 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 IGFBP7Q16270 282 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 LRRC73Q5JTD7 316 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TCTE1Q5JU00 501 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 FAAH2Q6GMR7 532 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM65Q6PI78 240 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 UQCC3Q6UW78 93 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ARSKQ6UWY0 536 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF836Q6ZNA1 936 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 DNM1P46Q6ZS02 220 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 MED25Q71SY5 747 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF550Q7Z398 422 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 FAM220AQ7Z4H9 259 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM17Q86X19 198 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 GKN2Q86XP6 184 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 PLXDC1Q8IUK5 500 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 NKAIN4Q8IVV8 208 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 PDZD9Q8IXQ8 264 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TIGD4Q8IY51 512 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ZNF440Q8IYI8 595 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SLC38A6Q8IZM9 456 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 PRR18Q8N4B5 295 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ZFP41Q8N8Y5 198 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 DNAAF1Q8NEP3 725 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 OR4K14Q8NGD5 310 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 OR2A1Q8NGT9 310 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 OR14A16Q8NHC5 309 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RPS4Y2Q8TD47 263 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TMEM255BQ8WV15 326 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SMPDL3BQ92485 455 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 CNOT9Q92600 299 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RSC1A1Q92681 617 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 GHSRQ92847 366 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 CDS1Q92903 461 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 PNPLA2Q96AD5 504 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 MIB2Q96AX9 1013 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 NACC2Q96BF6 587 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SGTBQ96EQ0 304 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 CNRIP1Q96F85 164 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 C4orf36Q96KX1 117 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 RBP7Q96R05 134 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SORBS1Q9BX66 1292 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SLCO5A1Q9H2Y9 848 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 TCEAL2Q9H3H9 227 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 KIR3DX1Q9H7L2 352 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ISG20L2Q9H9L3 353 aaKnown RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 LYRM4Q9HD34 91 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 HRASLSQ9HDD0 168 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 MYOZ1Q9NP98 299 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 OR6C2Q9NZP2 312 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 FAM30AQ9NZY2 134 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 ING1Q9UK53 422 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 C19orf53Q9UNZ5 99 aaPredicted RBP5.33□□□□□ -1.56
VPS33B-203ENST00000554264 SIGLEC7Q9Y286 467 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 V9GY05 133 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 HEATR5BQ9P2D3 2071 aa5.33□□□□□ -1.56
VPS33B-203ENST00000554264 LOC105369274A0A096LPK9 316 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ACOD1A6NK06 481 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 J3QLW9 94 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 SOCS6O14544 535 aa5.32□□□□□ -1.56
VPS33B-203ENST00000554264 ABCD4O14678 606 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms