RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 ZNF596Q8TC21 504 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 NEK7Q8TDX7 302 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 TBCKQ8TEA7 893 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 TCTEX1D2Q8WW35 142 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 CKAP2Q8WWK9 683 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 AP3S1Q92572 193 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 RASL10AQ92737 203 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 RBPMSQ93062 196 aaKnown RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 L3HYPDHQ96EM0 354 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 SH3YL1Q96HL8 342 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 C4orf45Q96LM5 186 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 MAGEB18Q96M61 343 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 DGAT2Q96PD7 388 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 SOSTQ9BQB4 213 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 AIF1LQ9BQI0 150 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 MGME1Q9BQP7 344 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 C11orf70Q9BRQ4 267 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 TTYH2Q9BSA4 534 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 MRPL13Q9BYD1 178 aaKnown RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 PARD6GQ9BYG4 376 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 TM6SF2Q9BZW4 377 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 ROPN1BQ9BZX4 212 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 GPR88Q9GZN0 384 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 SLITRK2Q9H156 845 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 MIXL1Q9H2W2 232 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 RGCCQ9H4X1 137 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 ASB7Q9H672 318 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 RPF2Q9H7B2 306 aaKnown RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 GPN2Q9H9Y4 310 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 WDR41Q9HAD4 459 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 ROPN1Q9HAT0 212 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 ZCCHC3Q9NUD5 404 aaKnown RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 PLEK2Q9NYT0 353 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 NLGN3Q9NZ94 848 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 MED11Q9P086 117 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 KLHL21Q9UJP4 597 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 SCP2D1Q9UJQ7 156 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 PURGQ9UJV8 347 aaKnown RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 C3orf18Q9UK00 162 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 SNX12Q9UMY4 172 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 SSR3Q9UNL2 185 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 POMT1Q9Y6A1 747 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 AP4B1Q9Y6B7 739 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 NUP210Q8TEM1 1887 aaPredicted RBP3.87□□□□□ -1.79
ATXN3-225ENST00000554214 CEP192Q8TEP8 1941 aa3.87□□□□□ -1.79
ATXN3-225ENST00000554214 COL5A1P20908 1838 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PCDH15Q96QU1 1955 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 KLF18A0A0U1RQI7 1052 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 A0A0X1KG70 313 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SLC5A10A0PJK1 596 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 J3QKU1 62 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 J3QRK9 145 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 BTN3A3O00478 584 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PRMT5O14744 637 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SCAMP2O15127 329 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 CFLARO15519 480 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 TLX2O43763 284 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 GGCTO75223 188 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SCO1O75880 301 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 AK1P00568 194 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SHBGP04278 402 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 RRASP10301 218 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 THRBP10828 461 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 GP1BBP13224 206 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 RPL35AP18077 110 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MAGP20916 626 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 GABRR1P24046 479 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 EEF1B2P24534 225 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 ATP5A1P25705 553 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 GABRR2P28476 465 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PTPN6P29350 595 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SFNP31947 248 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MC5RP33032 325 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SOX3P41225 446 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PRKCIP41743 596 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 CAPZBP47756 277 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 VAMP7P51809 220 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PRKXP51817 358 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PPP5CP53041 499 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PTENP60484 403 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MYL7Q01449 175 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 PDIA2Q13087 525 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 ILKQ13418 452 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 TRA2AQ13595 282 aaKnown RBP eCLIP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 LY6DQ14210 128 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 IL11RAQ14626 422 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MESDQ14696 234 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 P2RY14Q15391 338 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 HAGHQ16775 308 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 UPP1Q16831 310 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MICBQ29980 383 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MICAQ29983 383 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 AKIRIN2Q53H80 203 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 ACTBL2Q562R1 376 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 OGFRL1Q5TC84 451 aaPredicted RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 MFSD7Q6UXD7 560 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 FAM151BQ6UXP7 276 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 SPNS3Q6ZMD2 512 aa3.86□□□□□ -1.79
ATXN3-225ENST00000554214 EIF3MQ7L2H7 374 aaKnown RBP3.86□□□□□ -1.79
ATXN3-225ENST00000554214 ABHD12BQ7Z5M8 362 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms