RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 USP51Q70EK9 711 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 MDP1Q86V88 176 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 WFDC8Q8IUA0 241 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 OR10H5Q8NGA6 315 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 FAM222BQ8WU58 562 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 APH1BQ8WW43 257 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 RFKQ969G6 155 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 TEAD3Q99594 435 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 WDR76Q9H967 626 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 NOX3Q9HBY0 568 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 CCNB1IP1Q9NPC3 277 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 POLR1DQ9Y2S0 133 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 COMMD3-BMI1R4GMX3 469 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 HSPE1-MOB4S4R3N1 261 aa10.68□□□□□ -0.7
SHMT2-209ENST00000553949 FASNP49327 2511 aaKnown RBP10.68□□□□□ -0.7
SHMT2-209ENST00000553949 SPTBN1Q01082 2364 aaKnown RBP10.68□□□□□ -0.7
SHMT2-209ENST00000553949 RAB36O95755 333 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 MMP7P09237 267 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 EPXP11678 715 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 CBR1P16152 277 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF32P17041 273 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 HTR1FP30939 366 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ARR3P36575 388 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ENTPD1P49961 510 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ISL1P61371 349 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 PCBD1P61457 104 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 RAB1AP62820 205 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 AQP6Q13520 282 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 SP5Q6BEB4 398 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 TMEM53Q6P2H8 277 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 SYT9Q86SS6 491 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ERI1Q8IV48 349 aaKnown RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 C8orf59Q8N0T1 100 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 FAM169BQ8N8A8 192 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 Q96MT0 163 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 INTS14Q96SY0 518 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF184Q99676 751 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 WACQ9BTA9 647 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 CDADC1Q9BWV3 514 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 C1QTNF6Q9BXI9 259 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 RNF121Q9H920 327 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 MARCH7Q9H992 704 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 SLC24A3Q9HC58 644 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 MOV10Q9HCE1 1003 aaKnown RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 CLN6Q9NWW5 311 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 NPAP1Q9NZP6 1156 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 ASH2LQ9UBL3 628 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 WARS2Q9UGM6 360 aaKnown RBP10.67□□□□□ -0.7
SHMT2-209ENST00000553949 CYB5R1Q9UHQ9 305 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 KCNG2Q9UJ96 466 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 TIMM10BQ9Y5J6 103 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 LHFPL6Q9Y693 200 aa10.67□□□□□ -0.7
SHMT2-209ENST00000553949 CACNA1CQ13936 2221 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 SNTNA6NMZ2 147 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF593O00488 134 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 CASKO14936 926 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 SELENOFO60613 162 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 WBP4O75554 376 aaKnown RBP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 IGKV3-15P01624 115 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 SPARCP09486 303 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 PSKH1P11801 424 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 CRYGSP22914 178 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 RPS27P42677 84 aaKnown RBP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 ZNF83P51522 516 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 IDH3GP51553 393 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 PSG4Q00888 419 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 SCRN3Q0VDG4 424 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 TMED1Q13445 227 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 GGTLC2Q14390 218 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 PCK2Q16822 640 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 PABPC1L2AQ5JQF8 200 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 TEX30Q5JUR7 227 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 SLC18B1Q6NT16 456 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 CORO6Q6QEF8 472 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 THAP5Q7Z6K1 395 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 LINC00346Q8IVM7 164 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 TIGD4Q8IY51 512 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 CNIH3Q8TBE1 160 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 OR2H1Q9GZK4 316 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 HAO2Q9NYQ3 351 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 CRNNQ9UBG3 495 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 PLEKHB1Q9UF11 243 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 KCNN3Q9UGI6 736 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 RAB26Q9ULW5 256 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHMT2-209ENST00000553949 HCFC1P51610 2035 aa10.66□□□□□ -0.7
SHMT2-209ENST00000553949 M0R1B8 84 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 RER1O15258 196 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 TMCC2O75069 709 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 IGLV1-44P01699 117 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 CELA3BP08861 270 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 MRPL3P09001 348 aaKnown RBP10.65□□□□□ -0.7
SHMT2-209ENST00000553949 COX6B1P14854 86 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 COL8A1P27658 744 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 NAA10P41227 235 aaPredicted RBP10.65□□□□□ -0.7
SHMT2-209ENST00000553949 HIST1H3AP68431 136 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 RAB39AQ14964 217 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 C3orf36Q3SXR2 165 aa10.65□□□□□ -0.7
SHMT2-209ENST00000553949 HIST2H3PS2Q5TEC6 136 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms