RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 TNFRSF1AP19438 455 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 CDAP32320 146 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 PMELP40967 661 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 CRATP43155 626 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 PITPNBP48739 271 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 NME5P56597 212 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 GNB2P62879 340 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 OR1Q1Q15612 314 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF181Q2M3W8 571 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 WDR25Q64LD2 544 aaPredicted RBP7.5□□□□□ -1.21
PRKCH-208ENST00000553846 SLC27A4Q6P1M0 643 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 FOXL2NBQ6ZUU3 175 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 LRRC18Q8N456 261 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 OR2Z1Q8NG97 314 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 VANGL1Q8TAA9 524 aaPredicted RBP7.5□□□□□ -1.21
PRKCH-208ENST00000553846 BBS10Q8TAM1 723 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 TCP10LQ8TDR4 215 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 NEIL1Q96FI4 390 aaPredicted RBP7.5□□□□□ -1.21
PRKCH-208ENST00000553846 OR2H1Q9GZK4 316 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 SIRPDQ9H106 197 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 NANOGQ9H9S0 305 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 MEAF6Q9HAF1 191 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 SIAEQ9HAT2 523 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 ACOXLQ9NUZ1 547 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 THUMPD1Q9NXG2 353 aaKnown RBP7.5□□□□□ -1.21
PRKCH-208ENST00000553846 RPS6KB2Q9UBS0 482 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 MIOXQ9UGB7 285 aa7.5□□□□□ -1.21
PRKCH-208ENST00000553846 IGHV1-69DA0A0B4J2H0 117 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF816-ZNF321PA0A0X1KG74 233 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 SMIM23A6NLE4 172 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF879B4DU55 563 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 P2RY10O00398 339 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 RFXANKO14593 260 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 TYROBPO43914 113 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 TIMM8AO60220 97 aaPredicted RBP7.49□□□□□ -1.21
PRKCH-208ENST00000553846 PIP5K1CO60331 668 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 SLC2A10O95528 541 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 IGHV1-69P01742 117 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 IGHG1P01857 330 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 TSPAN19P0C672 248 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 LBPP18428 481 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 CCNOP22674 350 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 GDI2P50395 445 aaKnown RBP7.49□□□□□ -1.21
PRKCH-208ENST00000553846 EFNB2P52799 333 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 HSF2Q03933 536 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 DBPQ10586 325 aaPredicted RBP7.49□□□□□ -1.21
PRKCH-208ENST00000553846 COX10Q12887 443 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 RGNQ15493 299 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 NPTX1Q15818 432 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 ARMC4Q5T2S8 1044 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 LYPD2Q6UXB3 125 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF420Q8TAQ5 688 aaPredicted RBP7.49□□□□□ -1.21
PRKCH-208ENST00000553846 TBC1D15Q8TC07 691 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 ASB10Q8WXI3 467 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 SLC19A3Q9BZV2 496 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 SMURF2Q9HAU4 748 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 GRPEL1Q9HAV7 217 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 SLCO1B3Q9NPD5 702 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 MAN2C1Q9NTJ4 1040 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 CTSZQ9UBR2 303 aa7.49□□□□□ -1.21
PRKCH-208ENST00000553846 HUWE1Q7Z6Z7 4374 aaKnown RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 K7EIL1 84 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 IFNL4K9M1U5 179 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 SDHDO14521 159 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 ENSAO43768 121 aaKnown RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 SPAG7O75391 227 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 TRMUO75648 421 aaKnown RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 CYB5R3P00387 301 aaPredicted RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 TNFSF4P23510 183 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 UGT2B15P54855 530 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 ERVK-25P63136 954 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 COL10A1Q03692 680 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 FMODQ06828 376 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 ENDOGQ14249 297 aaKnown RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 HERPUD1Q15011 391 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 FAM201AQ5SY85 155 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 FAM27BQ5VT28 67 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 CCBE1Q6UXH8 406 aaPredicted RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 GDPGP1Q6ZNW5 385 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 ZER1Q7Z7L7 766 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 MSRB3Q8IXL7 192 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 HIPK4Q8NE63 616 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 GATAD2BQ8WXI9 593 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 PLEKHA8Q96JA3 519 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 MEGF10Q96KG7 1140 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 C4orf45Q96LM5 186 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 WDFY2Q96P53 400 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 PCGF1Q9BSM1 259 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 NUF2Q9BZD4 464 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 PAIP1Q9H074 479 aaKnown RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 SMURF1Q9HCE7 757 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 TBCCD1Q9NVR7 557 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 SLC25A37Q9NYZ2 338 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 ZNRD1Q9P1U0 126 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 EIF3KQ9UBQ5 218 aaKnown RBP7.48□□□□□ -1.21
PRKCH-208ENST00000553846 FBLN5Q9UBX5 448 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 LGALS13Q9UHV8 139 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 ZNF229Q9UJW7 825 aa7.48□□□□□ -1.21
PRKCH-208ENST00000553846 VPREB3Q9UKI3 123 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms