RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 POLR1DQ9Y2S0 133 aa16.9■□□□□ 0.3
PSEN1-207ENST00000553599 RPL36Q9Y3U8 105 aaKnown RBP16.9■□□□□ 0.3
PSEN1-207ENST00000553599 TIMM10BQ9Y5J6 103 aa16.9■□□□□ 0.3
PSEN1-207ENST00000553599 DENRO43583 198 aaKnown RBP16.89■□□□□ 0.29
PSEN1-207ENST00000553599 MPZL1O95297 269 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 SCG5P05408 212 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 CAPZA2P47755 286 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 MTNR1AP48039 350 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 CSNK2BP67870 215 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 SCRN3Q0VDG4 424 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 CDK5R2Q13319 367 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 TAB1Q15750 504 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 GSG1Q2KHT4 349 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 TIGD4Q8IY51 512 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 ZNF454Q8N9F8 522 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 ACBD4Q8NC06 268 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 GJC3Q8NFK1 279 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 OR52N5Q8NH56 324 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 WFIKKN1Q96NZ8 548 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 CNN2Q99439 309 aaKnown RBP16.89■□□□□ 0.29
PSEN1-207ENST00000553599 MNTQ99583 582 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 ZNF224Q9NZL3 707 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 CYB5R1Q9UHQ9 305 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 TENM4Q6N022 2769 aa16.89■□□□□ 0.29
PSEN1-207ENST00000553599 TVP23AA6NH52 213 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 PRSS44E7EML9 344 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 ZNF593O00488 134 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-207ENST00000553599 RAB36O95755 333 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 GPANK1O95872 356 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 HLA-HP01893 362 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 MMP7P09237 267 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-207ENST00000553599 CBR1P16152 277 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 RAB1AP62820 205 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 DBPQ10586 325 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-207ENST00000553599 UGT2A3Q6UWM9 527 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 SLC16A9Q7RTY1 509 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 ERI1Q8IV48 349 aaKnown RBP16.88■□□□□ 0.29
PSEN1-207ENST00000553599 DMRTC2Q8IXT2 367 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-207ENST00000553599 OR2AJ1Q8NGZ0 328 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 FBXO17Q96EF6 278 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 SPOCK3Q9BQ16 436 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 YIPF3Q9GZM5 350 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 WDR76Q9H967 626 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 CRNNQ9UBG3 495 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-207ENST00000553599 ASH2LQ9UBL3 628 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 PCDHGB1Q9Y5G3 927 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 LHFPL6Q9Y693 200 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 TMEM14AQ9Y6G1 99 aa16.88■□□□□ 0.29
PSEN1-207ENST00000553599 IRGMA1A4Y4 181 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 PTHP01270 115 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 IGKV3-15P01624 115 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 EPXP11678 715 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 CD79AP11912 226 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 ATP6V1E1P36543 226 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 KIR2DL3P43628 341 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 CXCR4P61073 352 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 HIST1H3AP68431 136 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 MEP1BQ16820 701 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 HIST2H3PS2Q5TEC6 136 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 KRT80Q6KB66 452 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 HIST2H3AQ71DI3 136 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 ALDH16A1Q8IZ83 802 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 CNIH3Q8TBE1 160 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 FAM222BQ8WU58 562 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 HTRA1Q92743 480 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 C1orf198Q9H425 327 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 RNF121Q9H920 327 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 ADGRL4Q9HBW9 690 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 PLCXD1Q9NUJ7 323 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 MRPS18AQ9NVS2 196 aaKnown RBP16.87■□□□□ 0.29
PSEN1-207ENST00000553599 AASSQ9UDR5 926 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 ATPIF1Q9UII2 106 aa16.87■□□□□ 0.29
PSEN1-207ENST00000553599 C19orf84I3L1E1 186 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 THBDP07204 575 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 SBK2P0C263 348 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 DBTP11182 482 aaKnown RBP16.86■□□□□ 0.29
PSEN1-207ENST00000553599 ZNF32P17041 273 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 PLP2Q04941 152 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 ZNF91Q05481 1191 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 RAB40BQ12829 278 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 KLHL22Q53GT1 634 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 SLC18B1Q6NT16 456 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 LYPD4Q6UWN0 246 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 RHOUQ7L0Q8 258 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.86■□□□□ 0.29
PSEN1-207ENST00000553599 MDP1Q86V88 176 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 OR6N2Q8NGY6 317 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 OTOSQ8NHW6 89 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 RNFT2Q96EX2 444 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 OR2H1Q9GZK4 316 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 LRRC42Q9Y546 428 aa16.86■□□□□ 0.29
PSEN1-207ENST00000553599 ANKHD1Q8IWZ3 2542 aaKnown RBP16.86■□□□□ 0.29
PSEN1-207ENST00000553599 ZNF503-AS2A6NEH8 195 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 PHYHO14832 338 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 CASKO14936 926 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 SELENOFO60613 162 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 GOSR1O95249 250 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 CLDN1O95832 211 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 SPARCP09486 303 aa16.85■□□□□ 0.29
PSEN1-207ENST00000553599 COX5BP10606 129 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms