RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SORCS2Q96PQ0 1159 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 SMR3AQ99954 134 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 CHID1Q9BWS9 393 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 MRPL37Q9BZE1 423 aaKnown RBP13.21□□□□□ -0.29
SHMT2-204ENST00000553324 OR2H1Q9GZK4 316 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 REV1Q9UBZ9 1251 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 DUSP13Q9UII6 198 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 NDRG4Q9ULP0 352 aaKnown RBP13.21□□□□□ -0.29
SHMT2-204ENST00000553324 SAMHD1Q9Y3Z3 626 aaKnown RBP13.21□□□□□ -0.29
SHMT2-204ENST00000553324 MTORP42345 2549 aa13.21□□□□□ -0.29
SHMT2-204ENST00000553324 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 DHRS12A0PJE2 317 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 C5orf49A4QMS7 147 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 M0R233 179 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 GPRIN2O60269 458 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 PPP1R3DO95685 299 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 LY6G6DO95868 133 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 CST1P01037 141 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 GASTP01350 101 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 LCKP06239 509 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 COX5BP10606 129 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 CCL2P13500 99 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 CTLA4P16410 223 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 COX10Q12887 443 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 BNIP1Q12981 228 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 ZNF770Q6IQ21 691 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-204ENST00000553324 ZNF620Q6ZNG0 422 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 RASSF6Q6ZTQ3 369 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 ZNF525Q8N782 197 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 SYNPRQ8TBG9 265 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-204ENST00000553324 ZNF416Q9BWM5 594 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 NUAK2Q9H093 628 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 RERGLQ9H628 205 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 ELOVL3Q9HB03 270 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 SLCO1C1Q9NYB5 712 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 IL20Q9NYY1 176 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 COA3Q9Y2R0 106 aaPredicted RBP13.2□□□□□ -0.3
SHMT2-204ENST00000553324 CDH10Q9Y6N8 788 aa13.2□□□□□ -0.3
SHMT2-204ENST00000553324 IGHV4-30-2A0A087WSY4 118 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 GNGT2O14610 69 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 TP53P04637 393 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-204ENST00000553324 ADRA2AP08913 450 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 FAM157BP0CG42 384 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 ZNF250P15622 560 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 HIST1H1CP16403 213 aaKnown RBP13.19□□□□□ -0.3
SHMT2-204ENST00000553324 TUBG1P23258 451 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 ARHGDIAP52565 204 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 GLO1Q04760 184 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 AQP6Q13520 282 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 ENDOGQ14249 297 aaKnown RBP13.19□□□□□ -0.3
SHMT2-204ENST00000553324 FLOT2Q14254 428 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 LEG1Q6P5S2 330 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 PTCHD4Q6ZW05 846 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 PAQR4Q8N4S7 273 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-204ENST00000553324 AQP11Q8NBQ7 271 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 OR9Q2Q8NGE9 314 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 AKR7LQ8NHP1 331 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 C10orf105Q8TEF2 133 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 DGCR6LQ9BY27 220 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 WNT5BQ9H1J7 359 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 MMADHCQ9H3L0 296 aaPredicted RBP13.19□□□□□ -0.3
SHMT2-204ENST00000553324 TUBG2Q9NRH3 451 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 U3KQV3 271 aa13.19□□□□□ -0.3
SHMT2-204ENST00000553324 GSC2O15499 205 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 ICMTO60725 284 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 MT-ND5P03915 603 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 CENPAP49450 140 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 KLF3P57682 345 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-204ENST00000553324 LOXL1Q08397 574 aaPredicted RBP13.18□□□□□ -0.3
SHMT2-204ENST00000553324 KCNMB1Q16558 191 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 ZNF718Q3SXZ3 478 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 UGT2A3Q6UWM9 527 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 SPATA24Q86W54 205 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 ADGRG5Q8IZF4 528 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 OR1J1Q8NGS3 322 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 OR4K13Q8NH42 304 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 CANT1Q8WVQ1 401 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 C4orf45Q96LM5 186 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 NMNAT3Q96T66 252 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 SYT3Q9BQG1 590 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 PIMREGQ9BSJ6 248 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 RACGAP1Q9H0H5 632 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 SRA1Q9HD15 236 aaKnown RBP13.18□□□□□ -0.3
SHMT2-204ENST00000553324 EMC7Q9NPA0 242 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 B9D1Q9UPM9 204 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 BAIAP2Q9UQB8 552 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 POMPQ9Y244 141 aa13.18□□□□□ -0.3
SHMT2-204ENST00000553324 IGLV3-9A0A075B6K5 115 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 LOC100509620A0A075B734 347 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 A0A1W2PPW3 197 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 ARRDC5A6NEK1 342 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 H3BSA7 217 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 SGCEO43556 437 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 SCG5P05408 212 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 DAOP14920 347 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 GCH1P30793 250 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 NKPD1Q17RQ9 610 aa13.17□□□□□ -0.3
SHMT2-204ENST00000553324 SLC36A3Q495N2 470 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms