RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 MMP27Q9H306 513 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 POFUT1Q9H488 388 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 EVA1AQ9H8M9 152 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 MEPEQ9NQ76 525 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-209ENST00000553308 ANGPT4Q9Y264 503 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 VWFP04275 2813 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 IGHV2-70DA0A0C4DH43 119 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 TRAPPC13A5PLN9 417 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 CENPBD1B2RD01 187 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 H3BSA7 217 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 ICMTO60725 284 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 THRBP10828 461 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 GPX2P18283 190 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 TNFRSF1AP19438 455 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 MDH2P40926 338 aaKnown RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 AQP2P41181 271 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 DAP3P51398 398 aaKnown RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 PCBP3P57721 371 aaKnown RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 KRTAP10-3P60369 221 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 CD47Q08722 323 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 TAF11Q15544 211 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 DEFB112Q30KQ8 113 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 ARMC4Q5T2S8 1044 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 OLFML2AQ68BL7 652 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF774Q6NX45 483 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 BLOC1S3Q6QNY0 202 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 BRD3OSQ6XYD6 125 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 PTOV1Q86YD1 416 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 C1QL4Q86Z23 238 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 MREGQ8N565 214 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 POU5F2Q8N7G0 328 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 OR4F5Q8NH21 305 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 MOSPD2Q8NHP6 518 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 PFN4Q8NHR9 129 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 DACT3Q96B18 629 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 SPDL1Q96EA4 605 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 SAMD8Q96LT4 415 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 CITED1Q99966 193 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 PRSS27Q9BQR3 290 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 CPPED1Q9BRF8 314 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 SSBP3Q9BWW4 388 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 MARCH7Q9H992 704 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 BEX1Q9HBH7 125 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 INIPQ9NRY2 104 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 C1RLQ9NZP8 487 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.61□□□□□ -1.19
SYNE2-209ENST00000553308 IL20RAQ9UHF4 553 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 PPP1R3CQ9UQK1 317 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 LRCH1Q9Y2L9 728 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 GMEB1Q9Y692 573 aa7.61□□□□□ -1.19
SYNE2-209ENST00000553308 A0A1B0GUS0 222 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 TMEM120BA0PK00 339 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 SRRM5B3KS81 715 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 TMEM178BH3BS89 294 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 M0QX08 132 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 M0QZ24 198 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 OR7A10O76100 309 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF205O95201 554 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 WNT2P09544 360 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 PPIAL4GP0DN37 164 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 RPS2P15880 293 aaKnown RBP7.6□□□□□ -1.19
SYNE2-209ENST00000553308 CD247P20963 164 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 TNFSF4P23510 183 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 LAP3P28838 519 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 MRPL19P49406 292 aaKnown RBP7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ERFP50548 548 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 MMP16P51512 607 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ARHGDIAP52565 204 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 STX1BP61266 288 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 TOP3AQ13472 1001 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF362Q5T0B9 420 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-209ENST00000553308 FAM27BQ5VT28 67 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 HIST2H2BDQ6DRA6 164 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 SLC25A47Q6Q0C1 308 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 FIP1L1Q6UN15 594 aaKnown RBP7.6□□□□□ -1.19
SYNE2-209ENST00000553308 BTNL3Q6UXE8 466 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 LRRN1Q6UXK5 716 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 HDDC2Q7Z4H3 204 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ZER1Q7Z7L7 766 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 C1orf174Q8IYL3 243 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 MUC20Q8N307 709 aaPredicted RBP7.6□□□□□ -1.19
SYNE2-209ENST00000553308 CLDN22Q8N7P3 220 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 OR10S1Q8NGN2 331 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ZDHHC16Q969W1 377 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 MPP4Q96JB8 637 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 C4orf45Q96LM5 186 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 OR2V2Q96R30 315 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 CHIAQ9BZP6 476 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 NANOGQ9H9S0 305 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 SMURF2Q9HAU4 748 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 ELOVL3Q9HB03 270 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 C20orf141Q9NUB4 165 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 CCDC167Q9P0B6 97 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 CORO2BQ9UQ03 480 aa7.6□□□□□ -1.19
SYNE2-209ENST00000553308 CLPSL1A2RUU4 121 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 EVPLLA8MZ36 301 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 TIMM23O14925 209 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 NDUFA7O95182 113 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 TSPAN15O95858 294 aa7.59□□□□□ -1.19
SYNE2-209ENST00000553308 ABHD16AO95870 558 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms