RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 OR6X1Q8NH79 312 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 NAT6Q93015 286 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 ASB9Q96DX5 294 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 CFAP53Q96M91 514 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 OR2M2Q96R28 347 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 ACP6Q9NPH0 428 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 TMEM9BQ9NQ34 198 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 AGPAT4Q9NRZ5 378 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 PRR34Q9NV39 138 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 CLN6Q9NWW5 311 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 DUX4Q9UBX2 424 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 TRAPPC4Q9Y296 219 aa3.49□□□□□ -1.85
SCFD1-209ENST00000553280 A0A1W2PPV4 95 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 TSPAN11A1L157 253 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 PRSS37A4D1T9 235 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 CHMP2AO43633 222 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 FLOT1O75955 427 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 RAB3DO95716 219 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 INSP01308 110 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 MBP02144 154 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 BGLAPP02818 100 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 IGHV4-34P06331 123 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 UBTFL6P0CB48 400 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-209ENST00000553280 RPS15AP62244 130 aaKnown RBP3.48□□□□□ -1.85
SCFD1-209ENST00000553280 PON3Q15166 354 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 TRMT5Q32P41 509 aaKnown RBP3.48□□□□□ -1.85
SCFD1-209ENST00000553280 RNF212Q495C1 297 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 UBE2UQ5VVX9 321 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 NPSR1Q6W5P4 371 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 ABHD13Q7L211 337 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 ABCA7Q8IZY2 2146 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 OR5T3Q8NGG3 340 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 OR10J6PQ8NGY7 276 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 CA5BP1Q8WTZ4 195 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 FAM3DQ96BQ1 224 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 PHYHIPLQ96FC7 376 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 NRTNQ99748 197 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 OR2AG1Q9H205 316 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 TMEM38AQ9H6F2 299 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 SLCO1B3Q9NPD5 702 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 ZC4H2Q9NQZ6 224 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 DYRK4Q9NR20 520 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF226Q9NYT6 803 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF629Q9UEG4 869 aaPredicted RBP3.48□□□□□ -1.85
SCFD1-209ENST00000553280 PCYOX1Q9UHG3 505 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 NUFIP1Q9UHK0 495 aaKnown RBP3.48□□□□□ -1.85
SCFD1-209ENST00000553280 TP53TG5Q9Y2B4 290 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 MRPS18BQ9Y676 258 aaKnown RBP3.48□□□□□ -1.85
SCFD1-209ENST00000553280 KCNE3Q9Y6H6 103 aa3.48□□□□□ -1.85
SCFD1-209ENST00000553280 CHD4Q14839 1912 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 A0A1B0GUH1 482 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 KMOO15229 486 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 TGM6O95932 706 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ARG1P05089 322 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 S100A9P06702 114 aaKnown RBP3.47□□□□□ -1.85
SCFD1-209ENST00000553280 DCNP07585 359 aaKnown RBP3.47□□□□□ -1.85
SCFD1-209ENST00000553280 GNAO1P09471 354 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ZDHHC11BP0C7U3 371 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 NR2C1P13056 603 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 CNR1P21554 472 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 F2RP25116 425 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 BMI1P35226 326 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 GPR1P46091 355 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ETV1P50549 477 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 RND2P52198 227 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 NCBP2P52298 156 aaKnown RBP eCLIP3.47□□□□□ -1.85
SCFD1-209ENST00000553280 NDPQ00604 133 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 SEMG2Q02383 582 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF79Q15937 498 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ZSCAN26Q16670 478 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 TTLL9Q3SXZ7 439 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 TMEM255AQ5JRV8 349 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 STRADAQ7RTN6 431 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 OAFQ86UD1 273 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 MYOCDQ8IZQ8 938 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 FAM71E2Q8N5Q1 922 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ACTRT1Q8TDG2 376 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 MITD1Q8WV92 249 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 GIMAP1Q8WWP7 306 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 DNAJC19Q96DA6 116 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 COL21A1Q96P44 957 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 FOXC2Q99958 501 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 NANOGQ9H9S0 305 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 MRM3Q9HC36 420 aaKnown RBP3.47□□□□□ -1.85
SCFD1-209ENST00000553280 PRSS16Q9NQE7 514 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ABCB10Q9NRK6 738 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 ZNF225Q9UK10 706 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 SMAD5-AS1Q9Y6J3 95 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 COMMD3-BMI1R4GMX3 469 aa3.47□□□□□ -1.85
SCFD1-209ENST00000553280 NFASCO94856 1347 aa3.46□□□□□ -1.85
SCFD1-209ENST00000553280 PES1O00541 588 aaKnown RBP3.46□□□□□ -1.86
SCFD1-209ENST00000553280 RAD51CO43502 376 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 FARS2O95363 451 aaKnown RBP3.46□□□□□ -1.86
SCFD1-209ENST00000553280 CSTAP01040 98 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 KRT16P08779 473 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 STAG3L2P0CL84 134 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 OR5H8P0DN80 308 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 ZNF30P17039 623 aa3.46□□□□□ -1.86
SCFD1-209ENST00000553280 RFC3P40938 356 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms