RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 EMC7Q9NPA0 242 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 POLE4Q9NR33 117 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 ZNF281Q9Y2X9 895 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 LHFPL6Q9Y693 200 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 CEP295Q9C0D2 2601 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 APC2O95996 2303 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 TRGV5A0A0B4J1U4 118 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 TMCC2O75069 709 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 SERPINA3P01011 423 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 HNRNPA0Q13151 305 aaKnown RBP17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 ZNF829Q3KNS6 432 aaPredicted RBP17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 ZMAT1Q5H9K5 638 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 IGFL3Q6UXB1 125 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 PRSS35Q8N3Z0 413 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 SPRR3Q9UBC9 169 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 PLEKHB1Q9UF11 243 aaPredicted RBP17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 MSRB2Q9Y3D2 182 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 LRP12Q9Y561 859 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 DMXL2Q8TDJ6 3036 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 IGKV3D-15A0A087WSY6 115 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 A0A1B0GVG6 124 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 SMIM30A4D0T7 59 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 OR4C45A6NMZ5 311 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 CASKO14936 926 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 MTNR1BP49286 362 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 OR7E24Q6IFN5 339 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 PLXDC2Q6UX71 529 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 FOXL2NBQ6ZUU3 175 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 MFSD4AQ8N468 514 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 TEX19Q8NA77 164 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 RNF133Q8WVZ7 376 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 PNPLA2Q96AD5 504 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 KCNS3Q9BQ31 491 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 LDAHQ9H6V9 325 aa17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 PAQR5Q9NXK6 330 aaPredicted RBP17.3■□□□□ 0.36
RBFOX1-215ENST00000553186 PNPP00491 289 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 C3AR1Q16581 482 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 YIF1BQ5BJH7 314 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 UNQ9370/PRO34162Q6UXP9 181 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 C4orf45Q96LM5 186 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 DCBLD2Q96PD2 775 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 MGAQ8IWI9 3026 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 DNAJC13O75165 2243 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 DHHO43323 396 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 SRSF10O75494 262 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 BMP4P12644 408 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 ZNF24P17028 368 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 RIDAP52758 137 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 CAV3P56539 151 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 DCTN2Q13561 401 aaKnown RBP17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 DEGS2Q6QHC5 323 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 AAED1Q7RTV5 226 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 NR2C2APQ86WQ0 139 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 OR10S1Q8NGN2 331 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 OR5AK2Q8NH90 309 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 FNDC9Q8TBE3 224 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 ZNF837Q96EG3 531 aaPredicted RBP17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 OR14A2Q96R54 314 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 ULBP2Q9BZM5 246 aa17.29■□□□□ 0.36
RBFOX1-215ENST00000553186 IQCMA0A1B0GVH7 501 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 CLDN25C9JDP6 229 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 CTDSP2O14595 271 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 ZNF254O75437 659 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 GATBO75879 557 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 IGHG3P01860 377 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 UCHL1P09936 223 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 CPN1P15169 458 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 KIR3DL2P43630 455 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 WDR38Q5JTN6 314 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 CFAP77Q6ZQR2 320 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 NABP1Q96AH0 204 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 TMEM45BQ96B21 275 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 WDYHV1Q96HA8 205 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 C1orf198Q9H425 327 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 PLGRKTQ9HBL7 147 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 GDF2Q9UK05 429 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 FBXL3Q9UKT7 428 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 PCDHGA9Q9Y5G4 932 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 TFECO14948 347 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 SLC43A1O75387 559 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 CCR9P51686 369 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 MFGE8Q08431 387 aaPredicted RBP17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 PAMR1Q6UXH9 720 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 SPACA3Q8IXA5 215 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 ZADH2Q8N4Q0 377 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 S100ZQ8WXG8 99 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 SLAMF6Q96DU3 332 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 EXO5Q9H790 373 aa17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 MCTS1Q9ULC4 181 aaKnown RBP17.28■□□□□ 0.36
RBFOX1-215ENST00000553186 TMEM212A6NML5 194 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 NCR1O76036 304 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 SYNGR4O95473 234 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 LSM6P62312 80 aaKnown RBP17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 IL17RDQ8NFM7 739 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 RBM24Q9BX46 236 aaKnown RBP17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 NELFAQ9H3P2 528 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 HMG20AQ9NP66 347 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 ASH2LQ9UBL3 628 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 PEX16Q9Y5Y5 336 aa17.27■□□□□ 0.36
RBFOX1-215ENST00000553186 A0A1W2PPK0 400 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms