RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 LYPD4Q6UWN0 246 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF627Q7L945 461 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 SYT9Q86SS6 491 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 LSRQ86X29 649 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 MARCH9Q86YJ5 346 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 IL17RDQ8NFM7 739 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 OR9K2Q8NGE7 335 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 OR5M1Q8NGP8 315 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 OR52N5Q8NH56 324 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TMEM203Q969S6 136 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 OR2M2Q96R28 347 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 TBX5Q99593 518 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 MROQ9BYG7 248 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 LINC00470Q9BZP3 86 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 EXOSC4Q9NPD3 245 aaKnown RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 FAM86C1Q9NVL1 165 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 MED29Q9NX70 200 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 RABL2AQ9UBK7 228 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 DKK4Q9UBT3 224 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ING1Q9UK53 422 aaPredicted RBP8.71□□□□□ -1.02
TMEM116-216ENST00000552800 RABL2BQ9UNT1 228 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 FLVCR1Q9Y5Y0 555 aa8.71□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF724A8MTY0 619 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 H7C1C5 153 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 CTDSP2O14595 271 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 PIN1P1O15428 100 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 PLGP00747 810 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 PSKH1P11801 424 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF823P16415 610 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 SRMP19623 302 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 MAPK3P27361 379 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 OTX1P32242 354 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 SFTPDP35247 375 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 THBS2P35442 1172 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 EVX1P49640 407 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 LCN6P62502 163 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 MRPS34P82930 218 aaKnown RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 MELKQ14680 651 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 INAQ16352 499 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 MEP1BQ16820 701 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 Q499Y3 187 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 FAM27BQ5VT28 67 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ARL9Q6T311 187 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 Q6ZNX1 250 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 FAM220AQ7Z4H9 259 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 CEACAM19Q7Z692 300 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ADGRE4PQ86SQ3 457 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 YRDCQ86U90 279 aaKnown RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 CATSPERDQ86XM0 798 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 FAM109AQ8N4B1 249 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 TMEM251Q8N6I4 163 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ZFP41Q8N8Y5 198 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 TMEM178AQ8NBL3 297 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 MINDY2Q8NBR6 621 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 OR6N2Q8NGY6 317 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 OR14L1PQ8NHC6 308 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 SMAP2Q8WU79 429 aaPredicted RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 CHPT1Q8WUD6 406 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 C11orf40Q8WZ69 217 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 C4orf45Q96LM5 186 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 AMELYQ99218 206 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 KCNJ15Q99712 375 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ATF6BQ99941 703 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 CCDC32Q9BV29 185 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 TMED9Q9BVK6 235 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 TTTY12Q9BZ98 90 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 C1orf198Q9H425 327 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 BCO1Q9HAY6 547 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ELOVL3Q9HB03 270 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 SNTG1Q9NSN8 517 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 DDX28Q9NUL7 540 aaKnown RBP8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ACOXLQ9NUZ1 547 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 SLCO1C1Q9NYB5 712 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 ABRACLQ9P1F3 81 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 GNG8Q9UK08 70 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 MED12Q93074 2177 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 CACNA1CQ13936 2221 aa8.7□□□□□ -1.02
TMEM116-216ENST00000552800 TVP23AA6NH52 213 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 FAM171A2A8MVW0 826 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 NKX2-8O15522 239 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 LRRTM2O43300 516 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 IGLV3-1P01715 115 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 WT1P19544 449 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 NPR2P20594 1047 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 EDNRAP25101 427 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 RIDAP52758 137 aaKnown RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 CLDN20P56880 219 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PPP3R1P63098 170 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 ADAM8P78325 824 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 DBPQ10586 325 aaPredicted RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SLC10A1Q14973 349 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF181Q2M3W8 571 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 ZNF544Q6NX49 715 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 RPUSD3Q6P087 351 aaKnown RBP8.69□□□□□ -1.02
TMEM116-216ENST00000552800 RPTNQ6XPR3 784 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SLC22A16Q86VW1 577 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 NR2C2APQ86WQ0 139 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PRSS35Q8N3Z0 413 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 PARP16Q8N5Y8 322 aa8.69□□□□□ -1.02
TMEM116-216ENST00000552800 SYT14Q8NB59 555 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms