RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 NANOGQ9H9S0 305 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 DCAF16Q9NXF7 216 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 IL20RAQ9UHF4 553 aa11.95□□□□□ -0.5
CHMP1A-210ENST00000551981 A0A1B0GUS0 222 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 SURF4O15260 269 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 TGDSO95455 350 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 MT-ND1P03886 318 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 PPIAL4GP0DN37 164 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 FUT1P19526 365 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 GSTM3P21266 225 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 MDKP21741 143 aaPredicted RBP11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 PCGF2P35227 344 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 MDH2P40926 338 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 AQP2P41181 271 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 SLC18A1P54219 525 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 SEC61A1P61619 476 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 ZMYND11Q15326 602 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 SPRNQ5BIV9 151 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 ARMC4Q5T2S8 1044 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 C16orf87Q6PH81 154 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 LRRN1Q6UXK5 716 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 C17orf107Q6ZR85 190 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 C9orf139Q6ZV77 190 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 PATL1Q86TB9 770 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 PTOV1Q86YD1 416 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 SLC30A8Q8IWU4 369 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 NPEPL1Q8NDH3 523 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 OR2Z1Q8NG97 314 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 NSMAFQ92636 917 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 C4orf45Q96LM5 186 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 CPPED1Q9BRF8 314 aaPredicted RBP11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 PCDHAC1Q9H158 963 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 MEPEQ9NQ76 525 aaPredicted RBP11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 MAN2C1Q9NTJ4 1040 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 PPP1R3CQ9UQK1 317 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 LRCH1Q9Y2L9 728 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 TIMM10BQ9Y5J6 103 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 MMP24Q9Y5R2 645 aa11.94□□□□□ -0.5
CHMP1A-210ENST00000551981 NPIPB13A6NJU9 1138 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 NPIPB4C9JG80 1138 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 F5H0A9 414 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 OR7A10O76100 309 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 GPANK1O95872 356 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 KNG1P01042 644 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 NGFP01138 241 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 CST2P09228 141 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 IGHV4-38-2P0DP08 117 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 TUBG1P23258 451 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 CPT2P23786 658 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 PAX8Q06710 450 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 FMODQ06828 376 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 PSG7Q13046 419 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 ZNF362Q5T0B9 420 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 OR4D11Q8NGI4 311 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 FNDC8Q8TC99 324 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 SLC26A7Q8TE54 656 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 RASSF5Q8WWW0 418 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 NMD3Q96D46 503 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 SGTBQ96EQ0 304 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 THOC1Q96FV9 657 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 RBP7Q96R05 134 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 WNT5BQ9H1J7 359 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 BEX1Q9HBH7 125 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 TUBG2Q9NRH3 451 aa11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 NDRG4Q9ULP0 352 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-210ENST00000551981 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 IFNL4K9M1U5 179 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 ABHD16AO95870 558 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 IGF2P01344 180 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 OMGP23515 440 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 LAP3P28838 519 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 CD80P33681 288 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 RBM34P42696 430 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 HNRNPA0Q13151 305 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 AGKQ53H12 422 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 RUNDC3AQ59EK9 446 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 INTS11Q5TA45 600 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 ZNF774Q6NX45 483 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 DLEU7Q6UYE1 221 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 TSPYL5Q86VY4 417 aaPredicted RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 OR4F5Q8NH21 305 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 PFN4Q8NHR9 129 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 HDAC2Q92769 488 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 PRSS27Q9BQR3 290 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 ALG12Q9BV10 488 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 SSBP3Q9BWW4 388 aaPredicted RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 TXNIPQ9H3M7 391 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 V9GYY5 206 aaPredicted RBP11.92□□□□□ -0.5
CHMP1A-210ENST00000551981 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 CEACAM18A8MTB9 384 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 ERLIN1O75477 346 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 PLATP00750 562 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 CRYBA1P05813 215 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 RPS2P15880 293 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 IDH3AP50213 366 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 TAS2R41P59536 307 aa11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-210ENST00000551981 SLC25A47Q6Q0C1 308 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms