RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MSR1P21757 451 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 APLNRP35414 380 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 KLF3P57682 345 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-209ENST00000551008 GLO1Q04760 184 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 PLP2Q04941 152 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 KRR1Q13601 381 aaKnown RBP11.11□□□□□ -0.63
NPAS3-209ENST00000551008 SPRNQ5BIV9 151 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 SPATA46Q5T0L3 261 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 ZER1Q7Z7L7 766 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 CYP4Z1Q86W10 505 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 OR1J1Q8NGS3 322 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 OR52J3Q8NH60 311 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 FNDC8Q8TC99 324 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 IPCEF1Q8WWN9 437 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-209ENST00000551008 PYURFQ96I23 114 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 ZNF570Q96NI8 536 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 RBP7Q96R05 134 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 CDRT15Q96T59 188 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 CHODLQ9H9P2 273 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 ZNF275Q9NSD4 429 aaPredicted RBP11.11□□□□□ -0.63
NPAS3-209ENST00000551008 TAGLN3Q9UI15 199 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 CDC42EP3Q9UKI2 254 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 ARL2BPQ9Y2Y0 163 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 DYSFO75923 2080 aa11.11□□□□□ -0.63
NPAS3-209ENST00000551008 ZSCAN5BA6NJL1 495 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 NDUFB2O95178 105 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 GPANK1O95872 356 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 TXNDC12O95881 172 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 PTHP01270 115 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 NR2C1P13056 603 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 ATP6V1B2P21281 511 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 CCNOP22674 350 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 SDHAP31040 664 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 RPL4P36578 427 aaKnown RBP11.1□□□□□ -0.63
NPAS3-209ENST00000551008 RBMXP38159 391 aaKnown RBP11.1□□□□□ -0.63
NPAS3-209ENST00000551008 CDKN2AP42771 156 aaKnown RBP11.1□□□□□ -0.63
NPAS3-209ENST00000551008 MMP15P51511 669 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 CDH15P55291 814 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 FAM166AQ6J272 317 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 CXXC5Q7LFL8 322 aaKnown RBP11.1□□□□□ -0.63
NPAS3-209ENST00000551008 ZNF540Q8NDQ6 660 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 OR1J2Q8NGS2 313 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 CLDND2Q8NHS1 167 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 SLC25A40Q8TBP6 338 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 RDH5Q92781 318 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 BCL2L14Q9BZR8 327 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 OR2J1Q9GZK6 312 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 SYT4Q9H2B2 425 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 HINT3Q9NQE9 182 aaKnown RBP11.1□□□□□ -0.63
NPAS3-209ENST00000551008 VSX1Q9NZR4 365 aaPredicted RBP11.1□□□□□ -0.63
NPAS3-209ENST00000551008 GRHPRQ9UBQ7 328 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 MAGEL2Q9UJ55 1249 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 CACNG2Q9Y698 323 aa11.1□□□□□ -0.63
NPAS3-209ENST00000551008 UNC119BA6NIH7 251 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 FAM157AC9JC47 383 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 SOCS2O14508 198 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 AHCYL1O43865 530 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 TGFAP01135 160 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 ERCC1P07992 297 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-209ENST00000551008 ACHEP22303 614 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 RAD52P43351 418 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 GSSP48637 474 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 GDI2P50395 445 aaKnown RBP11.09□□□□□ -0.63
NPAS3-209ENST00000551008 CHN2P52757 468 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 PPP1CBP62140 327 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 CCL8P80075 99 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 MRPS11P82912 194 aaKnown RBP11.09□□□□□ -0.63
NPAS3-209ENST00000551008 CCNIQ14094 377 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 NKPD1Q17RQ9 610 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 SAMD4BQ5PRF9 694 aaKnown RBP11.09□□□□□ -0.63
NPAS3-209ENST00000551008 FAM120AOSQ5T036 256 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 VASH1Q7L8A9 365 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-209ENST00000551008 SYT9Q86SS6 491 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 DEFB107AQ8IZN7 70 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 FITM2Q8N6M3 262 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 ICA1LQ8NDH6 482 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 KLF14Q8TD94 323 aaPredicted RBP11.09□□□□□ -0.63
NPAS3-209ENST00000551008 C11orf40Q8WZ69 217 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 SLC7A6Q92536 515 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 TSSK2Q96PF2 358 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 LRRC37BQ96QE4 947 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 NKIRAS2Q9NYR9 191 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 TIMM10BQ9Y5J6 103 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 IER3IP1Q9Y5U9 82 aa11.09□□□□□ -0.63
NPAS3-209ENST00000551008 IGLV1-36A0A0B4J1U3 117 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 TCRBV5S2A0A599 114 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 GADD45GO95257 159 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 PPP1R3DO95685 299 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 IGHV1-46P01743 117 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 GAAP10253 952 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 LMO4P61968 165 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 SPIBQ01892 262 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 CR1LQ2VPA4 569 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 CCDC92Q53HC0 331 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-209ENST00000551008 MBNL2Q5VZF2 373 aaKnown RBP11.08□□□□□ -0.64
NPAS3-209ENST00000551008 GPR139Q6DWJ6 353 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 DPY19L2P2Q6ZN68 376 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 ABHD4Q8TB40 342 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 HPS1Q92902 700 aa11.08□□□□□ -0.64
NPAS3-209ENST00000551008 NSMCE2Q96MF7 247 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms