RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 KCNMB1Q16558 191 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 MEP1BQ16820 701 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 ZNF672Q499Z4 452 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 PABPC1L2AQ5JQF8 200 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 ZBTB49Q6ZSB9 765 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 IL17RDQ8NFM7 739 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 OR10H5Q8NGA6 315 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 OR51L1Q8NGJ5 315 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 LILRB1Q8NHL6 650 aaPredicted RBP14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 EME1Q96AY2 570 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 NMNAT2Q9BZQ4 307 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 LIME1Q9H400 295 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 MED20Q9H944 212 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 USE1Q9NZ43 259 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 POLR1DQ9Y2S0 133 aa14.09□□□□□ -0.15
CHMP1A-209ENST00000550872 POLQO75417 2590 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 IGHV2OR16-5A0A0B4J2B6 119 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 ZAR1LA6NP61 321 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 PRR23D1E9PI22 279 aaPredicted RBP14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 HS3ST1O14792 307 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 PTHP01270 115 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 PRR23D2P0DMB1 279 aaPredicted RBP14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 GAAP10253 952 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 SPI1P17947 270 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 CALCRP30988 508 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 POLR2IP36954 125 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 ALDH3A2P51648 485 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 RAD23AP54725 363 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 CDH11P55287 796 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 PSG4Q00888 419 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 TEKQ02763 1124 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 SLX4IPQ5VYV7 408 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 SYT9Q86SS6 491 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 CPOQ8IVL8 374 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 ALDH16A1Q8IZ83 802 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 SLC26A10Q8NG04 563 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 AKR7LQ8NHP1 331 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNRF4Q8WWF5 429 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 PTP4A1Q93096 173 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 SLC29A1Q99808 456 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 WACQ9BTA9 647 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 HCAR1Q9BXC0 346 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 PRRG3Q9BZD7 231 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 OR2H1Q9GZK4 316 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 CISD1Q9NZ45 108 aaKnown RBP14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 EDARQ9UNE0 448 aa14.08□□□□□ -0.16
CHMP1A-209ENST00000550872 TVP23AA6NH52 213 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 TFP02787 698 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 CLUP10909 449 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF823P16415 610 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 APEX1P27695 318 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 FMO3P31513 532 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 APLNRP35414 380 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 SCRN3Q0VDG4 424 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 AQP6Q13520 282 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 ZIK1Q3SY52 487 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 PLBD1Q6P4A8 553 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF771Q7L3S4 317 aaPredicted RBP14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF584Q8IVC4 421 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 SLC30A7Q8NEW0 376 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 OR1J2Q8NGS2 313 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 OR6K6Q8NGW6 343 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 FBXW5Q969U6 566 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 CDADC1Q9BWV3 514 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 GABARAPL3Q9BY60 117 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 WNT5BQ9H1J7 359 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 OR51V1Q9H2C8 321 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 C1orf198Q9H425 327 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 CDH20Q9HBT6 801 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 HINT3Q9NQE9 182 aaKnown RBP14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 ASH2LQ9UBL3 628 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 DSCAMO60469 2012 aa14.07□□□□□ -0.16
CHMP1A-209ENST00000550872 E7EQL1 145 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 CCL2P13500 99 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 BLVRAP53004 296 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 TRIP10Q15642 601 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 C12orf73Q69YU5 71 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF774Q6NX45 483 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 B3GLCTQ6Y288 498 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 CXXC5Q7LFL8 322 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF611Q8N823 705 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF511Q8NB15 262 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 CPEB3Q8NE35 698 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 OR4F15Q8NGB8 312 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 MRPL22Q9NWU5 206 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 PLEKHA6Q9Y2H5 1048 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 ANKRD17O75179 2603 aaKnown RBP14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 CSMD2Q7Z408 3487 aa14.06□□□□□ -0.16
CHMP1A-209ENST00000550872 H0YHG0 523 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 SGCEO43556 437 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 PRKYO43930 277 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 ZNF35P13682 527 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 CCNOP22674 350 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 STOMP27105 288 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 GDI2P50395 445 aaKnown RBP14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 ADAM8P78325 824 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 HGFACQ04756 655 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 KEAP1Q14145 624 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 LRRC36Q1X8D7 754 aa14.05□□□□□ -0.16
CHMP1A-209ENST00000550872 TBC1D28Q2M2D7 210 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms