RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 PNRC2Q9NPJ4 139 aaKnown RBP8.89□□□□□ -0.99
RAB5B-206ENST00000549505 COQ3Q9NZJ6 369 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 STEAP1Q9UHE8 339 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 ZNF107Q9UII5 783 aaPredicted RBP8.89□□□□□ -0.99
RAB5B-206ENST00000549505 FOXD3Q9UJU5 478 aaPredicted RBP8.89□□□□□ -0.99
RAB5B-206ENST00000549505 PI4KAP42356 2102 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 KIAA1549Q9HCM3 1950 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 IGKV1D-43A0A0B4J1Z2 117 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 A0A1W2PNU3 283 aaPredicted RBP8.89□□□□□ -0.99
RAB5B-206ENST00000549505 MEIOCA2RUB1 952 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 MEGF11A6BM72 1044 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 NAP1L6A6NFF2 107 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 GABARAPH6UMI1 98 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
RAB5B-206ENST00000549505 LRP3O75074 770 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 ALX3O95076 343 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 CCL3P10147 92 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 PRKACBP22694 351 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 PTH2RP49190 550 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 SOX8P57073 446 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 ADAM8P78325 824 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 EIF2B1Q14232 305 aaKnown RBP8.89□□□□□ -0.99
RAB5B-206ENST00000549505 ETFDHQ16134 617 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 HYAL4Q2M3T9 481 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 TMEM123Q8N131 208 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 BEST3Q8N1M1 668 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 CDCP1Q9H5V8 836 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 FBXL3Q9UKT7 428 aa8.89□□□□□ -0.99
RAB5B-206ENST00000549505 SLC17A2O00624 439 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 MELKQ14680 651 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 RAB11FIP2Q7L804 512 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 ELMOD2Q8IZ81 293 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 CMTM4Q8IZR5 234 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 TCTE3Q8IZS6 198 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 OR10S1Q8NGN2 331 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 THEM6Q8WUY1 208 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 ST6GAL2Q96JF0 529 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 RBP7Q96R05 134 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 PIGQQ9BRB3 760 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 RERGLQ9H628 205 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 RCE1Q9Y256 329 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 SPTBP11277 2137 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 LRRC3CA6NJW4 275 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 FAM25AB3EWG3 89 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 FAM25CB3EWG5 89 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 FAM25GB3EWG6 89 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 CELA2AP08217 269 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 CSNK2A1P68400 391 aaPredicted RBP8.88□□□□□ -0.99
RAB5B-206ENST00000549505 POU3F1Q03052 451 aaPredicted RBP8.88□□□□□ -0.99
RAB5B-206ENST00000549505 GPR176Q14439 515 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 TMEM244Q5VVB8 128 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 SEZ6L2Q6UXD5 910 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 OR1J4Q8NGS1 313 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 LGALS14Q8TCE9 139 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 THAP3Q8WTV1 239 aaPredicted RBP8.88□□□□□ -0.99
RAB5B-206ENST00000549505 C11orf40Q8WZ69 217 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 VDAC3Q9Y277 283 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 PCNX3Q9H6A9 2034 aa8.88□□□□□ -0.99
RAB5B-206ENST00000549505 ASXL3Q9C0F0 2248 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 TRAV8-7A0A075B6U6 113 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 C2orf72A6NCS6 295 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 ZNF814B7Z6K7 855 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 SERPINI2O75830 405 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 ECDO95905 644 aaPredicted RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 PAHP00439 452 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 SNRPBP14678 240 aaKnown RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 GABRA1P14867 456 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 CD82P27701 267 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 BIDP55957 195 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 TPTEP56180 551 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 MFGE8Q08431 387 aaPredicted RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 NRN1LQ496H8 165 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 ABLIM2Q6H8Q1 611 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 ANKRD16Q6P6B7 361 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 CREB3L2Q70SY1 520 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 PRSS45Q7RTY3 260 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 NKAIN3Q8N8D7 197 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 SUN5Q8TC36 379 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 SSC4DQ8WTU2 575 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 FOXRED1Q96CU9 486 aaPredicted RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 NAA11Q9BSU3 229 aaPredicted RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 ZNF160Q9HCG1 818 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 TCF7L1Q9HCS4 588 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 NUFIP1Q9UHK0 495 aaKnown RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 AK6Q9Y3D8 172 aaKnown RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 CACNG2Q9Y698 323 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 CIB4A0PJX0 185 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 XRCC3O43542 346 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 LANCL1O43813 399 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 PLGP00747 810 aaPredicted RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 RAB6AP20340 208 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 CNR1P21554 472 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 OTX1P32242 354 aaPredicted RBP8.87□□□□□ -0.99
RAB5B-206ENST00000549505 OR5M10Q6IEU7 315 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 SLC7A6Q92536 515 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 SCMH1Q96GD3 660 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 C5orf34Q96MH7 638 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 TEKT2Q9UIF3 430 aa8.87□□□□□ -0.99
RAB5B-206ENST00000549505 NUBP2Q9Y5Y2 271 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms