RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 DEFB134Q4QY38 66 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF766Q5HY98 468 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 KRBOX4Q5JUW0 171 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 FAHD2BQ6P2I3 314 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-212ENST00000549162 DRAM2Q6UX65 266 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ZNF730Q6ZMV8 503 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 DCDC5Q6ZRR9 648 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 SLC22A16Q86VW1 577 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 MFSD4AQ8N468 514 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 SLC25A46Q96AG3 418 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 FAHD2AQ96GK7 314 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 MCHR1Q99705 422 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 NIPSNAP1Q9BPW8 284 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 WFDC6Q9BQY6 131 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 SLIRPQ9GZT3 109 aaKnown RBP4.28□□□□□ -1.72
SCAF11-212ENST00000549162 HDHD2Q9H0R4 259 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 FSCN3Q9NQT6 498 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 PARPBPQ9NWS1 579 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 KAAG1Q9UBP8 84 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 GNG14A0A1W2PPG7 69 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 FFAR3O14843 346 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 GPR42O15529 346 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 TNFSF13O75888 250 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 LHBP01229 141 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 PTHP01270 115 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 IGHV2-70P01814 119 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 GIFP27352 417 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 CHI3L1P36222 383 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-212ENST00000549162 PCBD1P61457 104 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 IL13RA2Q14627 380 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 PNLIPRP3Q17RR3 467 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 RSPO1Q2MKA7 263 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ASPHD2Q6ICH7 369 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 C11orf71Q6IPW1 123 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-212ENST00000549162 TRIM73Q86UV7 250 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 TMCO5AQ8N6Q1 288 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 SLC26A7Q8TE54 656 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 S100ZQ8WXG8 99 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ABHD14BQ96IU4 210 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 COX4I2Q96KJ9 171 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ENKD1Q9H0I2 346 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 SERINC1Q9NRX5 453 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 CYSLTR2Q9NS75 346 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 P4HTMQ9NXG6 502 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 RHCGQ9UBD6 479 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 ASH2LQ9UBL3 628 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 SEC14L3Q9UDX4 400 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 R4GMQ9 66 aa4.28□□□□□ -1.72
SCAF11-212ENST00000549162 A0A087WWL8 130 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 KRT87PA6NCN2 255 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CDC42EP2O14613 210 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TLX3O43711 291 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SCAF4O95104 1147 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ADRA2AP08913 450 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CBR1P16152 277 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TCN1P20061 433 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CALCRP30988 508 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ARR3P36575 388 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PGGT1BP53609 377 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 LGALS3BPQ08380 585 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ARL6IP1Q15041 203 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TFAP2EQ6VUC0 442 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TCTEX1D1Q8N7M0 179 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF555Q8NEP9 628 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 STMN2Q93045 179 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TAAR8Q969N4 342 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 FAM162AQ96A26 154 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SLC38A2Q96QD8 506 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TEX12Q9BXU0 123 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 EBPLQ9BY08 206 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PARD6GQ9BYG4 376 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 METTL8Q9H825 291 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ANKRA2Q9H9E1 313 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 UNKLQ9H9P5 680 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 TIGARQ9NQ88 270 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 POLE4Q9NR33 117 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 RBFOX1Q9NWB1 397 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 MRPL15Q9P015 296 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 A0A1B0GTI1 187 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 EFCAB9A8MZ26 197 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 KIF1CO43896 1103 aaKnown RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 IL6RP08887 468 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ADORA3P0DMS8 318 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 GP1BBP13224 206 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 MAPK3P27361 379 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 SOX3P41225 446 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ZNF45Q02386 682 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 QPRTQ15274 297 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PLEKHN1Q494U1 663 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 ACSF3Q4G176 576 aaPredicted RBP4.27□□□□□ -1.73
SCAF11-212ENST00000549162 CLVS2Q5SYC1 327 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 C6orf52Q5T4I8 152 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 AGAP7PQ5VUJ5 663 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 Q6ZT83 130 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 PGAP1Q75T13 922 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 FAM214BQ7L5A3 538 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 HS3ST5Q8IZT8 346 aa4.27□□□□□ -1.73
SCAF11-212ENST00000549162 DUSP18Q8NEJ0 188 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms